Gene : Seita.4G225700 S. italica v2.2
Defline:  (1 of 1) PTHR13789//PTHR13789:SF213 - MONOOXYGENASE Genomic Order:  2257
Name:  ? Seita.4G225700 Secondary Identifier:  ? PAC:32709063
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.4G225700 0.5kb upstream 0.5kb upstream 2403 true scaffold_4: 34621794-34624196 Setaria italica
Seita.4G225700 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 34623697-34624196 Setaria italica
Seita.4G225700 0.5kb downstream 0.5kb downstream 2403 true scaffold_4: 34621294-34623696 Setaria italica
Seita.4G225700 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 34621294-34621793 Setaria italica
Seita.4G225700 1.0kb upstream 1.0kb upstream 2903 true scaffold_4: 34621794-34624696 Setaria italica
Seita.4G225700 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 34623697-34624696 Setaria italica
Seita.4G225700 1.0kb downstream 1.0kb downstream 2903 true scaffold_4: 34620794-34623696 Setaria italica
Seita.4G225700 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 34620794-34621793 Setaria italica
Seita.4G225700 2.0kb upstream 2.0kb upstream 3903 true scaffold_4: 34621794-34625696 Setaria italica
Seita.4G225700 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 34623697-34625696 Setaria italica
Seita.4G225700 2.0kb downstream 2.0kb downstream 3903 true scaffold_4: 34619794-34623696 Setaria italica
Seita.4G225700 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 34619794-34621793 Setaria italica
Seita.4G225700 5.0kb upstream 5.0kb upstream 6903 true scaffold_4: 34621794-34628696 Setaria italica
Seita.4G225700 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 34623697-34628696 Setaria italica
Seita.4G225700 5.0kb downstream 5.0kb downstream 6903 true scaffold_4: 34616794-34623696 Setaria italica
Seita.4G225700 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 34616794-34621793 Setaria italica
Seita.4G225700 10.0kb upstream 10.0kb upstream 11903 true scaffold_4: 34621794-34633696 Setaria italica
Seita.4G225700 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 34623697-34633696 Setaria italica
Seita.4G225700 10.0kb downstream 10.0kb downstream 11903 true scaffold_4: 34611794-34623696 Setaria italica
Seita.4G225700 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 34611794-34621793 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182325 5267 Panicoideae View MSA
124574961 5269 Grass View MSA
122045559 5273 Angiosperm View MSA
123429089 5275 Viridiplantae View MSA
121345627 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.292        
cufflinks 0.716        
cufflinks 0.378        
cufflinks 0.811        
cufflinks 0.667        
cufflinks 0.566        
cufflinks 0.515        
cufflinks 0.519        
cufflinks 0.475        
cufflinks 0.405        
cufflinks 0.252        
cufflinks 0.107     Low Low
cufflinks 1.056       High
cufflinks 0.586        
cufflinks 0.262        
cufflinks 0.752        
cufflinks 0.185       Low
cufflinks 0.161       Low
cufflinks 2.031       High
cufflinks 0.453        

0 Strain