Gene : Seita.4G232600 S. italica v2.2
Genomic Order:  2326 Name:  ? Seita.4G232600
Secondary Identifier:  ? PAC:32707391
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.4G232600 0.5kb upstream 0.5kb upstream 4418 true scaffold_4: 35471491-35475908 Setaria italica
Seita.4G232600 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 35471491-35471990 Setaria italica
Seita.4G232600 0.5kb downstream 0.5kb downstream 4418 true scaffold_4: 35471991-35476408 Setaria italica
Seita.4G232600 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 35475909-35476408 Setaria italica
Seita.4G232600 1.0kb upstream 1.0kb upstream 4918 true scaffold_4: 35470991-35475908 Setaria italica
Seita.4G232600 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 35470991-35471990 Setaria italica
Seita.4G232600 1.0kb downstream 1.0kb downstream 4918 true scaffold_4: 35471991-35476908 Setaria italica
Seita.4G232600 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 35475909-35476908 Setaria italica
Seita.4G232600 2.0kb upstream 2.0kb upstream 5918 true scaffold_4: 35469991-35475908 Setaria italica
Seita.4G232600 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 35469991-35471990 Setaria italica
Seita.4G232600 2.0kb downstream 2.0kb downstream 5918 true scaffold_4: 35471991-35477908 Setaria italica
Seita.4G232600 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 35475909-35477908 Setaria italica
Seita.4G232600 5.0kb upstream 5.0kb upstream 8918 true scaffold_4: 35466991-35475908 Setaria italica
Seita.4G232600 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 35466991-35471990 Setaria italica
Seita.4G232600 5.0kb downstream 5.0kb downstream 8918 true scaffold_4: 35471991-35480908 Setaria italica
Seita.4G232600 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 35475909-35480908 Setaria italica
Seita.4G232600 10.0kb upstream 10.0kb upstream 13918 true scaffold_4: 35461991-35475908 Setaria italica
Seita.4G232600 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 35461991-35471990 Setaria italica
Seita.4G232600 10.0kb downstream 10.0kb downstream 13918 true scaffold_4: 35471991-35485908 Setaria italica
Seita.4G232600 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 35475909-35485908 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187641 5267 Panicoideae View MSA
124570859 5269 Grass View MSA
122051659 5273 Angiosperm View MSA
121312601 5274 Embryophyte View MSA
123349758 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.141        
cufflinks 1.143        
cufflinks 0.055     Low Low
cufflinks 0.067     Low Low
cufflinks 0.282        
cufflinks 0.984        
cufflinks 0.978        
cufflinks 0.791        
cufflinks 0.68        
cufflinks 0.807        
cufflinks 1.109        
cufflinks 0.993        
cufflinks 0.747        
cufflinks 0.094     Low Low
cufflinks 1.262        
cufflinks 0.444        
cufflinks 1.168        
cufflinks 0.198        
cufflinks 0.051     Low Low
cufflinks 1.267        

0 Strain