Gene : Seita.4G254400 S. italica v2.2
Defline:  (1 of 2) KOG4766 - Uncharacterized conserved protein Genomic Order:  2544
Name:  ? Seita.4G254400 Secondary Identifier:  ? PAC:32706232
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.4G254400 0.5kb upstream 0.5kb upstream 2121 true scaffold_4: 37451773-37453893 Setaria italica
Seita.4G254400 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 37453394-37453893 Setaria italica
Seita.4G254400 0.5kb downstream 0.5kb downstream 2121 true scaffold_4: 37451273-37453393 Setaria italica
Seita.4G254400 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 37451273-37451772 Setaria italica
Seita.4G254400 1.0kb upstream 1.0kb upstream 2621 true scaffold_4: 37451773-37454393 Setaria italica
Seita.4G254400 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 37453394-37454393 Setaria italica
Seita.4G254400 1.0kb downstream 1.0kb downstream 2621 true scaffold_4: 37450773-37453393 Setaria italica
Seita.4G254400 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 37450773-37451772 Setaria italica
Seita.4G254400 2.0kb upstream 2.0kb upstream 3621 true scaffold_4: 37451773-37455393 Setaria italica
Seita.4G254400 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 37453394-37455393 Setaria italica
Seita.4G254400 2.0kb downstream 2.0kb downstream 3621 true scaffold_4: 37449773-37453393 Setaria italica
Seita.4G254400 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 37449773-37451772 Setaria italica
Seita.4G254400 5.0kb upstream 5.0kb upstream 6621 true scaffold_4: 37451773-37458393 Setaria italica
Seita.4G254400 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 37453394-37458393 Setaria italica
Seita.4G254400 5.0kb downstream 5.0kb downstream 6621 true scaffold_4: 37446773-37453393 Setaria italica
Seita.4G254400 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 37446773-37451772 Setaria italica
Seita.4G254400 10.0kb upstream 10.0kb upstream 11621 true scaffold_4: 37451773-37463393 Setaria italica
Seita.4G254400 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 37453394-37463393 Setaria italica
Seita.4G254400 10.0kb downstream 10.0kb downstream 11621 true scaffold_4: 37441773-37453393 Setaria italica
Seita.4G254400 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 37441773-37451772 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122199628 5267 Panicoideae View MSA
124587452 5269 Grass View MSA
122043328 5273 Angiosperm View MSA
121346242 5274 Embryophyte View MSA
123427938 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 80.926     High  
cufflinks 68.027     High  
cufflinks 84.841     High  
cufflinks 95.048     High  
cufflinks 62.225     High Low
cufflinks 88.663     High  
cufflinks 65.671     High  
cufflinks 160.532     High High
cufflinks 62.517     High Low
cufflinks 195.881     High High
cufflinks 77.68     High  
cufflinks 107.751     High  
cufflinks 132.508     High High
cufflinks 131.648     High High
cufflinks 88.172     High  
cufflinks 49.225     High Low
cufflinks 123.498     High  
cufflinks 58.315     High Low
cufflinks 110.834     High  
cufflinks 104.329     High  

0 Strain