Gene : Seita.4G253900 S. italica v2.2
Defline:  (1 of 3) PTHR11216//PTHR11216:SF73 - EH DOMAIN Genomic Order:  2539
Name:  ? Seita.4G253900 Secondary Identifier:  ? PAC:32708739
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.4G253900 0.5kb upstream 0.5kb upstream 6162 true scaffold_4: 37410816-37416977 Setaria italica
Seita.4G253900 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 37416478-37416977 Setaria italica
Seita.4G253900 0.5kb downstream 0.5kb downstream 6162 true scaffold_4: 37410316-37416477 Setaria italica
Seita.4G253900 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 37410316-37410815 Setaria italica
Seita.4G253900 1.0kb upstream 1.0kb upstream 6662 true scaffold_4: 37410816-37417477 Setaria italica
Seita.4G253900 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 37416478-37417477 Setaria italica
Seita.4G253900 1.0kb downstream 1.0kb downstream 6662 true scaffold_4: 37409816-37416477 Setaria italica
Seita.4G253900 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 37409816-37410815 Setaria italica
Seita.4G253900 2.0kb upstream 2.0kb upstream 7662 true scaffold_4: 37410816-37418477 Setaria italica
Seita.4G253900 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 37416478-37418477 Setaria italica
Seita.4G253900 2.0kb downstream 2.0kb downstream 7662 true scaffold_4: 37408816-37416477 Setaria italica
Seita.4G253900 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 37408816-37410815 Setaria italica
Seita.4G253900 5.0kb upstream 5.0kb upstream 10662 true scaffold_4: 37410816-37421477 Setaria italica
Seita.4G253900 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 37416478-37421477 Setaria italica
Seita.4G253900 5.0kb downstream 5.0kb downstream 10662 true scaffold_4: 37405816-37416477 Setaria italica
Seita.4G253900 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 37405816-37410815 Setaria italica
Seita.4G253900 10.0kb upstream 10.0kb upstream 15662 true scaffold_4: 37410816-37426477 Setaria italica
Seita.4G253900 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 37416478-37426477 Setaria italica
Seita.4G253900 10.0kb downstream 10.0kb downstream 15662 true scaffold_4: 37400816-37416477 Setaria italica
Seita.4G253900 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 37400816-37410815 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122192720 5267 Panicoideae View MSA
124580075 5269 Grass View MSA
122047763 5273 Angiosperm View MSA
123428944 5275 Viridiplantae View MSA
121344712 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.335        
cufflinks 8.63        
cufflinks 8.294        
cufflinks 8.922        
cufflinks 7.046        
cufflinks 8.642        
cufflinks 8.144        
cufflinks 7.228        
cufflinks 5.421       Low
cufflinks 5.148       Low
cufflinks 8.139        
cufflinks 14.158     High High
cufflinks 12.611       High
cufflinks 8.821        
cufflinks 10.786        
cufflinks 8.313        
cufflinks 12.139       High
cufflinks 16.462     High High
cufflinks 6.655        
cufflinks 10.435        

0 Strain