Gene : Seita.4G261400 S. italica v2.2
Defline:  (1 of 1) PTHR10641//PTHR10641:SF616 - MYB-LIKE DNA-BINDING PROTEIN MYB Genomic Order:  2614
Name:  ? Seita.4G261400 Secondary Identifier:  ? PAC:32709459
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.4G261400 0.5kb upstream 0.5kb upstream 2338 true scaffold_4: 37970182-37972519 Setaria italica
Seita.4G261400 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 37970182-37970681 Setaria italica
Seita.4G261400 0.5kb downstream 0.5kb downstream 2338 true scaffold_4: 37970682-37973019 Setaria italica
Seita.4G261400 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 37972520-37973019 Setaria italica
Seita.4G261400 1.0kb upstream 1.0kb upstream 2838 true scaffold_4: 37969682-37972519 Setaria italica
Seita.4G261400 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 37969682-37970681 Setaria italica
Seita.4G261400 1.0kb downstream 1.0kb downstream 2838 true scaffold_4: 37970682-37973519 Setaria italica
Seita.4G261400 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 37972520-37973519 Setaria italica
Seita.4G261400 2.0kb upstream 2.0kb upstream 3838 true scaffold_4: 37968682-37972519 Setaria italica
Seita.4G261400 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 37968682-37970681 Setaria italica
Seita.4G261400 2.0kb downstream 2.0kb downstream 3838 true scaffold_4: 37970682-37974519 Setaria italica
Seita.4G261400 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 37972520-37974519 Setaria italica
Seita.4G261400 5.0kb upstream 5.0kb upstream 6838 true scaffold_4: 37965682-37972519 Setaria italica
Seita.4G261400 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 37965682-37970681 Setaria italica
Seita.4G261400 5.0kb downstream 5.0kb downstream 6838 true scaffold_4: 37970682-37977519 Setaria italica
Seita.4G261400 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 37972520-37977519 Setaria italica
Seita.4G261400 10.0kb upstream 10.0kb upstream 11838 true scaffold_4: 37960682-37972519 Setaria italica
Seita.4G261400 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 37960682-37970681 Setaria italica
Seita.4G261400 10.0kb downstream 10.0kb downstream 11838 true scaffold_4: 37970682-37982519 Setaria italica
Seita.4G261400 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 37972520-37982519 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175909 5267 Panicoideae View MSA
124578214 5269 Grass View MSA
122048275 5273 Angiosperm View MSA
123429079 5275 Viridiplantae View MSA
121350966 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.547        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.136        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain