Gene : Seita.4G186500 S. italica v2.2
Defline:  (1 of 1) 3.1.21.7 - Deoxyribonuclease V / Escherichia coli endodeoxyribonuclease V Genomic Order:  1865
Name:  ? Seita.4G186500 Secondary Identifier:  ? PAC:32709570
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.4G186500 0.5kb upstream 0.5kb upstream 4232 true scaffold_4: 30422214-30426445 Setaria italica
Seita.4G186500 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 30422214-30422713 Setaria italica
Seita.4G186500 0.5kb downstream 0.5kb downstream 4232 true scaffold_4: 30422714-30426945 Setaria italica
Seita.4G186500 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 30426446-30426945 Setaria italica
Seita.4G186500 1.0kb upstream 1.0kb upstream 4732 true scaffold_4: 30421714-30426445 Setaria italica
Seita.4G186500 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 30421714-30422713 Setaria italica
Seita.4G186500 1.0kb downstream 1.0kb downstream 4732 true scaffold_4: 30422714-30427445 Setaria italica
Seita.4G186500 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 30426446-30427445 Setaria italica
Seita.4G186500 2.0kb upstream 2.0kb upstream 5732 true scaffold_4: 30420714-30426445 Setaria italica
Seita.4G186500 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 30420714-30422713 Setaria italica
Seita.4G186500 2.0kb downstream 2.0kb downstream 5732 true scaffold_4: 30422714-30428445 Setaria italica
Seita.4G186500 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 30426446-30428445 Setaria italica
Seita.4G186500 5.0kb upstream 5.0kb upstream 8732 true scaffold_4: 30417714-30426445 Setaria italica
Seita.4G186500 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 30417714-30422713 Setaria italica
Seita.4G186500 5.0kb downstream 5.0kb downstream 8732 true scaffold_4: 30422714-30431445 Setaria italica
Seita.4G186500 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 30426446-30431445 Setaria italica
Seita.4G186500 10.0kb upstream 10.0kb upstream 13732 true scaffold_4: 30412714-30426445 Setaria italica
Seita.4G186500 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 30412714-30422713 Setaria italica
Seita.4G186500 10.0kb downstream 10.0kb downstream 13732 true scaffold_4: 30422714-30436445 Setaria italica
Seita.4G186500 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 30426446-30436445 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191991 5267 Panicoideae View MSA
124581035 5269 Grass View MSA
122045127 5273 Angiosperm View MSA
121346633 5274 Embryophyte View MSA
123426791 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.535        
cufflinks 3.734        
cufflinks 2.864        
cufflinks 3.22        
cufflinks 2.457        
cufflinks 3.643        
cufflinks 2.888        
cufflinks 2.448        
cufflinks 1.858       Low
cufflinks 2.302       Low
cufflinks 2.695        
cufflinks 4.293       High
cufflinks 5.91       High
cufflinks 2.291       Low
cufflinks 3.884        
cufflinks 3.312        
cufflinks 4.822       High
cufflinks 2.589        
cufflinks 2.38        
cufflinks 3.946        

0 Strain