Gene : Seita.4G204600 S. italica v2.2
Genomic Order:  2046 Name:  ? Seita.4G204600
Secondary Identifier:  ? PAC:32709167
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.4G204600 0.5kb upstream 0.5kb upstream 6529 true scaffold_4: 32246330-32252858 Setaria italica
Seita.4G204600 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 32246330-32246829 Setaria italica
Seita.4G204600 0.5kb downstream 0.5kb downstream 6529 true scaffold_4: 32246830-32253358 Setaria italica
Seita.4G204600 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 32252859-32253358 Setaria italica
Seita.4G204600 1.0kb upstream 1.0kb upstream 7029 true scaffold_4: 32245830-32252858 Setaria italica
Seita.4G204600 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 32245830-32246829 Setaria italica
Seita.4G204600 1.0kb downstream 1.0kb downstream 7029 true scaffold_4: 32246830-32253858 Setaria italica
Seita.4G204600 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 32252859-32253858 Setaria italica
Seita.4G204600 2.0kb upstream 2.0kb upstream 8029 true scaffold_4: 32244830-32252858 Setaria italica
Seita.4G204600 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 32244830-32246829 Setaria italica
Seita.4G204600 2.0kb downstream 2.0kb downstream 8029 true scaffold_4: 32246830-32254858 Setaria italica
Seita.4G204600 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 32252859-32254858 Setaria italica
Seita.4G204600 5.0kb upstream 5.0kb upstream 11029 true scaffold_4: 32241830-32252858 Setaria italica
Seita.4G204600 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 32241830-32246829 Setaria italica
Seita.4G204600 5.0kb downstream 5.0kb downstream 11029 true scaffold_4: 32246830-32257858 Setaria italica
Seita.4G204600 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 32252859-32257858 Setaria italica
Seita.4G204600 10.0kb upstream 10.0kb upstream 16029 true scaffold_4: 32236830-32252858 Setaria italica
Seita.4G204600 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 32236830-32246829 Setaria italica
Seita.4G204600 10.0kb downstream 10.0kb downstream 16029 true scaffold_4: 32246830-32262858 Setaria italica
Seita.4G204600 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 32252859-32262858 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121804213 5273 Angiosperm View MSA
122065015 5267 Panicoideae View MSA
124364331 5269 Grass View MSA
121075355 5274 Embryophyte View MSA
123114978 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.011     Low  
cufflinks 0.05     Low High
cufflinks 0.012     Low  
cufflinks 0.002     Low Low
cufflinks 0.001     Low Low
cufflinks 0.037     Low High
cufflinks 0.008     Low  
cufflinks 0.004     Low  
cufflinks 0.016     Low  
cufflinks 0.042     Low High
cufflinks 0.013     Low  
cufflinks 0.015     Low  
cufflinks 0.014     Low  
cufflinks 0.018     Low  
cufflinks 0.008     Low  
cufflinks 0.011     Low  
cufflinks 0.013     Low  
cufflinks 0.004     Low  
cufflinks 0.002     Low Low
cufflinks 0.013     Low  

0 Strain