Gene : Seita.4G218700 S. italica v2.2
Defline:  (1 of 2) PTHR19321//PTHR19321:SF11 - PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED Genomic Order:  2187
Name:  ? Seita.4G218700 Secondary Identifier:  ? PAC:32707059
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.4G218700 0.5kb upstream 0.5kb upstream 5943 true scaffold_4: 33836915-33842857 Setaria italica
Seita.4G218700 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 33842358-33842857 Setaria italica
Seita.4G218700 0.5kb downstream 0.5kb downstream 5943 true scaffold_4: 33836415-33842357 Setaria italica
Seita.4G218700 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 33836415-33836914 Setaria italica
Seita.4G218700 1.0kb upstream 1.0kb upstream 6443 true scaffold_4: 33836915-33843357 Setaria italica
Seita.4G218700 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 33842358-33843357 Setaria italica
Seita.4G218700 1.0kb downstream 1.0kb downstream 6443 true scaffold_4: 33835915-33842357 Setaria italica
Seita.4G218700 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 33835915-33836914 Setaria italica
Seita.4G218700 2.0kb upstream 2.0kb upstream 7443 true scaffold_4: 33836915-33844357 Setaria italica
Seita.4G218700 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 33842358-33844357 Setaria italica
Seita.4G218700 2.0kb downstream 2.0kb downstream 7443 true scaffold_4: 33834915-33842357 Setaria italica
Seita.4G218700 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 33834915-33836914 Setaria italica
Seita.4G218700 5.0kb upstream 5.0kb upstream 10443 true scaffold_4: 33836915-33847357 Setaria italica
Seita.4G218700 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 33842358-33847357 Setaria italica
Seita.4G218700 5.0kb downstream 5.0kb downstream 10443 true scaffold_4: 33831915-33842357 Setaria italica
Seita.4G218700 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 33831915-33836914 Setaria italica
Seita.4G218700 10.0kb upstream 10.0kb upstream 15443 true scaffold_4: 33836915-33852357 Setaria italica
Seita.4G218700 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 33842358-33852357 Setaria italica
Seita.4G218700 10.0kb downstream 10.0kb downstream 15443 true scaffold_4: 33826915-33842357 Setaria italica
Seita.4G218700 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 33826915-33836914 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189890 5267 Panicoideae View MSA
124574142 5269 Grass View MSA
122046856 5273 Angiosperm View MSA
121350592 5274 Embryophyte View MSA
123428292 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.433        
cufflinks 5.486       High
cufflinks 1.401       Low
cufflinks 1.041       Low
cufflinks 1.914        
cufflinks 5.138       High
cufflinks 5.022       High
cufflinks 3.378        
cufflinks 4.079        
cufflinks 2.122        
cufflinks 3.965        
cufflinks 2.478        
cufflinks 1.988        
cufflinks 1.859        
cufflinks 3.748        
cufflinks 2.557        
cufflinks 3.236        
cufflinks 2.297        
cufflinks 0.616       Low
cufflinks 3.281        

0 Strain