Gene : Seita.4G220900 S. italica v2.2
Defline:  (1 of 1) PTHR19241:SF155 - ABC TRANSPORTER G FAMILY MEMBER 26 Genomic Order:  2209
Name:  ? Seita.4G220900 Secondary Identifier:  ? PAC:32707948
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.4G220900 0.5kb upstream 0.5kb upstream 3460 true scaffold_4: 34069312-34072771 Setaria italica
Seita.4G220900 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 34069312-34069811 Setaria italica
Seita.4G220900 0.5kb downstream 0.5kb downstream 3460 true scaffold_4: 34069812-34073271 Setaria italica
Seita.4G220900 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 34072772-34073271 Setaria italica
Seita.4G220900 1.0kb upstream 1.0kb upstream 3960 true scaffold_4: 34068812-34072771 Setaria italica
Seita.4G220900 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 34068812-34069811 Setaria italica
Seita.4G220900 1.0kb downstream 1.0kb downstream 3960 true scaffold_4: 34069812-34073771 Setaria italica
Seita.4G220900 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 34072772-34073771 Setaria italica
Seita.4G220900 2.0kb upstream 2.0kb upstream 4960 true scaffold_4: 34067812-34072771 Setaria italica
Seita.4G220900 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 34067812-34069811 Setaria italica
Seita.4G220900 2.0kb downstream 2.0kb downstream 4960 true scaffold_4: 34069812-34074771 Setaria italica
Seita.4G220900 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 34072772-34074771 Setaria italica
Seita.4G220900 5.0kb upstream 5.0kb upstream 7960 true scaffold_4: 34064812-34072771 Setaria italica
Seita.4G220900 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 34064812-34069811 Setaria italica
Seita.4G220900 5.0kb downstream 5.0kb downstream 7960 true scaffold_4: 34069812-34077771 Setaria italica
Seita.4G220900 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 34072772-34077771 Setaria italica
Seita.4G220900 10.0kb upstream 10.0kb upstream 12960 true scaffold_4: 34059812-34072771 Setaria italica
Seita.4G220900 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 34059812-34069811 Setaria italica
Seita.4G220900 10.0kb downstream 10.0kb downstream 12960 true scaffold_4: 34069812-34082771 Setaria italica
Seita.4G220900 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 34072772-34082771 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122183979 5267 Panicoideae View MSA
124575786 5269 Grass View MSA
122047603 5273 Angiosperm View MSA
123428903 5275 Viridiplantae View MSA
121347832 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 7.104       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.37        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.067     Low  
cufflinks 0.011     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.019     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.022     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.035     Low  

0 Strain