Gene : Seita.4G223300 S. italica v2.2
Defline:  (1 of 1) PTHR11695//PTHR11695:SF518 - ALCOHOL DEHYDROGENASE RELATED Genomic Order:  2233
Name:  ? Seita.4G223300 Secondary Identifier:  ? PAC:32708102
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.4G223300 0.5kb upstream 0.5kb upstream 3063 true scaffold_4: 34378512-34381574 Setaria italica
Seita.4G223300 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 34378512-34379011 Setaria italica
Seita.4G223300 0.5kb downstream 0.5kb downstream 3063 true scaffold_4: 34379012-34382074 Setaria italica
Seita.4G223300 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 34381575-34382074 Setaria italica
Seita.4G223300 1.0kb upstream 1.0kb upstream 3563 true scaffold_4: 34378012-34381574 Setaria italica
Seita.4G223300 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 34378012-34379011 Setaria italica
Seita.4G223300 1.0kb downstream 1.0kb downstream 3563 true scaffold_4: 34379012-34382574 Setaria italica
Seita.4G223300 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 34381575-34382574 Setaria italica
Seita.4G223300 2.0kb upstream 2.0kb upstream 4563 true scaffold_4: 34377012-34381574 Setaria italica
Seita.4G223300 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 34377012-34379011 Setaria italica
Seita.4G223300 2.0kb downstream 2.0kb downstream 4563 true scaffold_4: 34379012-34383574 Setaria italica
Seita.4G223300 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 34381575-34383574 Setaria italica
Seita.4G223300 5.0kb upstream 5.0kb upstream 7563 true scaffold_4: 34374012-34381574 Setaria italica
Seita.4G223300 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 34374012-34379011 Setaria italica
Seita.4G223300 5.0kb downstream 5.0kb downstream 7563 true scaffold_4: 34379012-34386574 Setaria italica
Seita.4G223300 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 34381575-34386574 Setaria italica
Seita.4G223300 10.0kb upstream 10.0kb upstream 12563 true scaffold_4: 34369012-34381574 Setaria italica
Seita.4G223300 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 34369012-34379011 Setaria italica
Seita.4G223300 10.0kb downstream 10.0kb downstream 12563 true scaffold_4: 34379012-34391574 Setaria italica
Seita.4G223300 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 34381575-34391574 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122199460 5267 Panicoideae View MSA
124588217 5269 Grass View MSA
122049093 5273 Angiosperm View MSA
121311245 5274 Embryophyte View MSA
123428381 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.048     Low  
cufflinks 0.871       High
cufflinks 0.014     Low Low
cufflinks 0.021     Low Low
cufflinks 0.014     Low Low
cufflinks 0.813       High
cufflinks 0.188        
cufflinks 0.109     Low  
cufflinks 0.039     Low  
cufflinks 0.108     Low  
cufflinks 0.03     Low  
cufflinks 0.435        
cufflinks 0.391        
cufflinks 0.021     Low Low
cufflinks 2.727       High
cufflinks 0.016     Low Low
cufflinks 0.414        
cufflinks 0.155        
cufflinks 0.104        
cufflinks 2.954       High

0 Strain