Gene : Seita.4G222300 S. italica v2.2
Defline:  (1 of 63) PF00153 - Mitochondrial carrier protein (Mito_carr) Genomic Order:  2223
Name:  ? Seita.4G222300 Secondary Identifier:  ? PAC:32708285
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.4G222300 0.5kb upstream 0.5kb upstream 6785 true scaffold_4: 34259305-34266089 Setaria italica
Seita.4G222300 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 34265590-34266089 Setaria italica
Seita.4G222300 0.5kb downstream 0.5kb downstream 6785 true scaffold_4: 34258805-34265589 Setaria italica
Seita.4G222300 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 34258805-34259304 Setaria italica
Seita.4G222300 1.0kb upstream 1.0kb upstream 7285 true scaffold_4: 34259305-34266589 Setaria italica
Seita.4G222300 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 34265590-34266589 Setaria italica
Seita.4G222300 1.0kb downstream 1.0kb downstream 7285 true scaffold_4: 34258305-34265589 Setaria italica
Seita.4G222300 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 34258305-34259304 Setaria italica
Seita.4G222300 2.0kb upstream 2.0kb upstream 8285 true scaffold_4: 34259305-34267589 Setaria italica
Seita.4G222300 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 34265590-34267589 Setaria italica
Seita.4G222300 2.0kb downstream 2.0kb downstream 8285 true scaffold_4: 34257305-34265589 Setaria italica
Seita.4G222300 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 34257305-34259304 Setaria italica
Seita.4G222300 5.0kb upstream 5.0kb upstream 11285 true scaffold_4: 34259305-34270589 Setaria italica
Seita.4G222300 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 34265590-34270589 Setaria italica
Seita.4G222300 5.0kb downstream 5.0kb downstream 11285 true scaffold_4: 34254305-34265589 Setaria italica
Seita.4G222300 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 34254305-34259304 Setaria italica
Seita.4G222300 10.0kb upstream 10.0kb upstream 16285 true scaffold_4: 34259305-34275589 Setaria italica
Seita.4G222300 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 34265590-34275589 Setaria italica
Seita.4G222300 10.0kb downstream 10.0kb downstream 16285 true scaffold_4: 34249305-34265589 Setaria italica
Seita.4G222300 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 34249305-34259304 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122193436 5267 Panicoideae View MSA
124588022 5269 Grass View MSA
122042034 5273 Angiosperm View MSA
123429077 5275 Viridiplantae View MSA
121349229 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.07        
cufflinks 6.778        
cufflinks 3.805       Low
cufflinks 3.484       Low
cufflinks 6.089        
cufflinks 7.065        
cufflinks 5.897        
cufflinks 11.683       High
cufflinks 11.509       High
cufflinks 6.962        
cufflinks 7.279        
cufflinks 7.742        
cufflinks 6.657        
cufflinks 5.337        
cufflinks 6.5        
cufflinks 4.84       Low
cufflinks 7.724        
cufflinks 5.43        
cufflinks 6.361        
cufflinks 7.421        

0 Strain