Gene : Seita.5G014700 S. italica v2.2
Defline:  (1 of 1) PTHR11649:SF5 - GTP-BINDING PROTEIN Genomic Order:  147
Name:  ? Seita.5G014700 Secondary Identifier:  ? PAC:32684379
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.5G014700 0.5kb upstream 0.5kb upstream 6459 true scaffold_5: 1824738-1831196 Setaria italica
Seita.5G014700 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 1830697-1831196 Setaria italica
Seita.5G014700 0.5kb downstream 0.5kb downstream 6459 true scaffold_5: 1824238-1830696 Setaria italica
Seita.5G014700 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 1824238-1824737 Setaria italica
Seita.5G014700 1.0kb upstream 1.0kb upstream 6959 true scaffold_5: 1824738-1831696 Setaria italica
Seita.5G014700 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 1830697-1831696 Setaria italica
Seita.5G014700 1.0kb downstream 1.0kb downstream 6959 true scaffold_5: 1823738-1830696 Setaria italica
Seita.5G014700 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 1823738-1824737 Setaria italica
Seita.5G014700 2.0kb upstream 2.0kb upstream 7959 true scaffold_5: 1824738-1832696 Setaria italica
Seita.5G014700 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 1830697-1832696 Setaria italica
Seita.5G014700 2.0kb downstream 2.0kb downstream 7959 true scaffold_5: 1822738-1830696 Setaria italica
Seita.5G014700 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 1822738-1824737 Setaria italica
Seita.5G014700 5.0kb upstream 5.0kb upstream 10959 true scaffold_5: 1824738-1835696 Setaria italica
Seita.5G014700 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 1830697-1835696 Setaria italica
Seita.5G014700 5.0kb downstream 5.0kb downstream 10959 true scaffold_5: 1819738-1830696 Setaria italica
Seita.5G014700 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 1819738-1824737 Setaria italica
Seita.5G014700 10.0kb upstream 10.0kb upstream 15959 true scaffold_5: 1824738-1840696 Setaria italica
Seita.5G014700 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 1830697-1840696 Setaria italica
Seita.5G014700 10.0kb downstream 10.0kb downstream 15959 true scaffold_5: 1814738-1830696 Setaria italica
Seita.5G014700 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 1814738-1824737 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186085 5267 Panicoideae View MSA
124581098 5269 Grass View MSA
122045813 5273 Angiosperm View MSA
121347341 5274 Embryophyte View MSA
123428429 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.115        
cufflinks 2.614       High
cufflinks 2.496        
cufflinks 1.681        
cufflinks 1.588       Low
cufflinks 3.162       High
cufflinks 1.583       Low
cufflinks 1.838        
cufflinks 1.944        
cufflinks 1.449       Low
cufflinks 1.873        
cufflinks 2.371        
cufflinks 1.527       Low
cufflinks 2.459        
cufflinks 2.557        
cufflinks 1.901        
cufflinks 2.767       High
cufflinks 1.961        
cufflinks 1.417       Low
cufflinks 2.622       High

0 Strain