Gene : Seita.5G032100 S. italica v2.2
Defline:  (1 of 2) PTHR11601//PTHR11601:SF37 - CYSTEINE DESULFURYLASE Genomic Order:  321
Name:  ? Seita.5G032100 Secondary Identifier:  ? PAC:32684126
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.5G032100 0.5kb upstream 0.5kb upstream 2314 true scaffold_5: 3081483-3083796 Setaria italica
Seita.5G032100 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 3083297-3083796 Setaria italica
Seita.5G032100 0.5kb downstream 0.5kb downstream 2314 true scaffold_5: 3080983-3083296 Setaria italica
Seita.5G032100 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 3080983-3081482 Setaria italica
Seita.5G032100 1.0kb upstream 1.0kb upstream 2814 true scaffold_5: 3081483-3084296 Setaria italica
Seita.5G032100 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 3083297-3084296 Setaria italica
Seita.5G032100 1.0kb downstream 1.0kb downstream 2814 true scaffold_5: 3080483-3083296 Setaria italica
Seita.5G032100 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 3080483-3081482 Setaria italica
Seita.5G032100 2.0kb upstream 2.0kb upstream 3814 true scaffold_5: 3081483-3085296 Setaria italica
Seita.5G032100 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 3083297-3085296 Setaria italica
Seita.5G032100 2.0kb downstream 2.0kb downstream 3814 true scaffold_5: 3079483-3083296 Setaria italica
Seita.5G032100 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 3079483-3081482 Setaria italica
Seita.5G032100 5.0kb upstream 5.0kb upstream 6814 true scaffold_5: 3081483-3088296 Setaria italica
Seita.5G032100 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 3083297-3088296 Setaria italica
Seita.5G032100 5.0kb downstream 5.0kb downstream 6814 true scaffold_5: 3076483-3083296 Setaria italica
Seita.5G032100 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 3076483-3081482 Setaria italica
Seita.5G032100 10.0kb upstream 10.0kb upstream 11814 true scaffold_5: 3081483-3093296 Setaria italica
Seita.5G032100 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 3083297-3093296 Setaria italica
Seita.5G032100 10.0kb downstream 10.0kb downstream 11814 true scaffold_5: 3071483-3083296 Setaria italica
Seita.5G032100 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 3071483-3081482 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122192772 5267 Panicoideae View MSA
124585056 5269 Grass View MSA
122047079 5273 Angiosperm View MSA
121347897 5274 Embryophyte View MSA
123426680 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.989        
cufflinks 0.133       Low
cufflinks 0.553        
cufflinks 0.499        
cufflinks 0.315        
cufflinks 0.233        
cufflinks 0.541        
cufflinks 0.288        
cufflinks 0.202       Low
cufflinks 1.736        
cufflinks 1.35        
cufflinks 3.295        
cufflinks 4.933       High
cufflinks 1.553        
cufflinks 6.526       High
cufflinks 0.37        
cufflinks 9.162       High
cufflinks 0.094     Low Low
cufflinks 1.105        
cufflinks 9.646       High

0 Strain