Gene : Seita.4G267100 S. italica v2.2
Defline:  (1 of 1) PTHR21443 - CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 7 Genomic Order:  2671
Name:  ? Seita.4G267100 Secondary Identifier:  ? PAC:32709286
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.4G267100 0.5kb upstream 0.5kb upstream 5545 true scaffold_4: 38479982-38485526 Setaria italica
Seita.4G267100 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 38479982-38480481 Setaria italica
Seita.4G267100 0.5kb downstream 0.5kb downstream 5545 true scaffold_4: 38480482-38486026 Setaria italica
Seita.4G267100 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 38485527-38486026 Setaria italica
Seita.4G267100 1.0kb upstream 1.0kb upstream 6045 true scaffold_4: 38479482-38485526 Setaria italica
Seita.4G267100 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 38479482-38480481 Setaria italica
Seita.4G267100 1.0kb downstream 1.0kb downstream 6045 true scaffold_4: 38480482-38486526 Setaria italica
Seita.4G267100 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 38485527-38486526 Setaria italica
Seita.4G267100 2.0kb upstream 2.0kb upstream 7045 true scaffold_4: 38478482-38485526 Setaria italica
Seita.4G267100 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 38478482-38480481 Setaria italica
Seita.4G267100 2.0kb downstream 2.0kb downstream 7045 true scaffold_4: 38480482-38487526 Setaria italica
Seita.4G267100 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 38485527-38487526 Setaria italica
Seita.4G267100 5.0kb upstream 5.0kb upstream 10045 true scaffold_4: 38475482-38485526 Setaria italica
Seita.4G267100 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 38475482-38480481 Setaria italica
Seita.4G267100 5.0kb downstream 5.0kb downstream 10045 true scaffold_4: 38480482-38490526 Setaria italica
Seita.4G267100 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 38485527-38490526 Setaria italica
Seita.4G267100 10.0kb upstream 10.0kb upstream 15045 true scaffold_4: 38470482-38485526 Setaria italica
Seita.4G267100 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 38470482-38480481 Setaria italica
Seita.4G267100 10.0kb downstream 10.0kb downstream 15045 true scaffold_4: 38480482-38495526 Setaria italica
Seita.4G267100 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 38485527-38495526 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187602 5267 Panicoideae View MSA
124577502 5269 Grass View MSA
122041603 5273 Angiosperm View MSA
121347669 5274 Embryophyte View MSA
123424690 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.101     High  
cufflinks 17.319     High High
cufflinks 6.726       Low
cufflinks 7.045       Low
cufflinks 7.002       Low
cufflinks 16.72     High High
cufflinks 11.916        
cufflinks 9.578        
cufflinks 11.965        
cufflinks 8.969        
cufflinks 14.323     High  
cufflinks 13.681     High  
cufflinks 14.567     High  
cufflinks 7.746       Low
cufflinks 15.885     High High
cufflinks 8.749        
cufflinks 13.868        
cufflinks 9.555        
cufflinks 7.628       Low
cufflinks 18.867     High High

0 Strain