Gene : Seita.4G270200 S. italica v2.2
Defline:  (1 of 5) PTHR11764//PTHR11764:SF14 - LANOSTEROL SYNTHASE Genomic Order:  2702
Name:  ? Seita.4G270200 Secondary Identifier:  ? PAC:32708261
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.4G270200 0.5kb upstream 0.5kb upstream 8550 true scaffold_4: 38724263-38732812 Setaria italica
Seita.4G270200 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 38732313-38732812 Setaria italica
Seita.4G270200 0.5kb downstream 0.5kb downstream 8550 true scaffold_4: 38723763-38732312 Setaria italica
Seita.4G270200 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 38723763-38724262 Setaria italica
Seita.4G270200 1.0kb upstream 1.0kb upstream 9050 true scaffold_4: 38724263-38733312 Setaria italica
Seita.4G270200 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 38732313-38733312 Setaria italica
Seita.4G270200 1.0kb downstream 1.0kb downstream 9050 true scaffold_4: 38723263-38732312 Setaria italica
Seita.4G270200 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 38723263-38724262 Setaria italica
Seita.4G270200 2.0kb upstream 2.0kb upstream 10050 true scaffold_4: 38724263-38734312 Setaria italica
Seita.4G270200 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 38732313-38734312 Setaria italica
Seita.4G270200 2.0kb downstream 2.0kb downstream 10050 true scaffold_4: 38722263-38732312 Setaria italica
Seita.4G270200 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 38722263-38724262 Setaria italica
Seita.4G270200 5.0kb upstream 5.0kb upstream 13050 true scaffold_4: 38724263-38737312 Setaria italica
Seita.4G270200 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 38732313-38737312 Setaria italica
Seita.4G270200 5.0kb downstream 5.0kb downstream 13050 true scaffold_4: 38719263-38732312 Setaria italica
Seita.4G270200 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 38719263-38724262 Setaria italica
Seita.4G270200 10.0kb upstream 10.0kb upstream 18050 true scaffold_4: 38724263-38742312 Setaria italica
Seita.4G270200 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 38732313-38742312 Setaria italica
Seita.4G270200 10.0kb downstream 10.0kb downstream 18050 true scaffold_4: 38714263-38732312 Setaria italica
Seita.4G270200 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 38714263-38724262 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028959 5273 Angiosperm View MSA
122195588 5267 Panicoideae View MSA
124584750 5269 Grass View MSA
121298379 5274 Embryophyte View MSA
123336355 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.106       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.677       High
cufflinks 0.003     Low  
cufflinks 0.003     Low  
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.001     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.001     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain