Gene : Seita.4G270900 S. italica v2.2
Genomic Order:  2709 Name:  ? Seita.4G270900
Secondary Identifier:  ? PAC:32707903
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.4G270900 0.5kb upstream 0.5kb upstream 1626 true scaffold_4: 38782829-38784454 Setaria italica
Seita.4G270900 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 38783955-38784454 Setaria italica
Seita.4G270900 0.5kb downstream 0.5kb downstream 1626 true scaffold_4: 38782329-38783954 Setaria italica
Seita.4G270900 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 38782329-38782828 Setaria italica
Seita.4G270900 1.0kb upstream 1.0kb upstream 2126 true scaffold_4: 38782829-38784954 Setaria italica
Seita.4G270900 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 38783955-38784954 Setaria italica
Seita.4G270900 1.0kb downstream 1.0kb downstream 2126 true scaffold_4: 38781829-38783954 Setaria italica
Seita.4G270900 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 38781829-38782828 Setaria italica
Seita.4G270900 2.0kb upstream 2.0kb upstream 3126 true scaffold_4: 38782829-38785954 Setaria italica
Seita.4G270900 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 38783955-38785954 Setaria italica
Seita.4G270900 2.0kb downstream 2.0kb downstream 3126 true scaffold_4: 38780829-38783954 Setaria italica
Seita.4G270900 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 38780829-38782828 Setaria italica
Seita.4G270900 5.0kb upstream 5.0kb upstream 6126 true scaffold_4: 38782829-38788954 Setaria italica
Seita.4G270900 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 38783955-38788954 Setaria italica
Seita.4G270900 5.0kb downstream 5.0kb downstream 6126 true scaffold_4: 38777829-38783954 Setaria italica
Seita.4G270900 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 38777829-38782828 Setaria italica
Seita.4G270900 10.0kb upstream 10.0kb upstream 11126 true scaffold_4: 38782829-38793954 Setaria italica
Seita.4G270900 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 38783955-38793954 Setaria italica
Seita.4G270900 10.0kb downstream 10.0kb downstream 11126 true scaffold_4: 38772829-38783954 Setaria italica
Seita.4G270900 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 38772829-38782828 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191878 5267 Panicoideae View MSA
124581429 5269 Grass View MSA
122051130 5273 Angiosperm View MSA
121349570 5274 Embryophyte View MSA
123425322 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.276        
cufflinks 0.501        
cufflinks 0.053     Low Low
cufflinks 0.207        
cufflinks 0.636        
cufflinks 0.521        
cufflinks 0.6        
cufflinks 0.891       High
cufflinks 1.347       High
cufflinks 0.548        
cufflinks 0.095     Low  
cufflinks 0.05     Low Low
cufflinks 0.03     Low Low
cufflinks 0.266        
cufflinks 0.069     Low Low
cufflinks 1.102       High
cufflinks 0.116     Low  
cufflinks 0.446        
cufflinks 0.447        
cufflinks 0.067     Low Low

0 Strain