Gene : Seita.4G273500 S. italica v2.2
Defline:  (1 of 1) PTHR11206//PTHR11206:SF173 - MULTIDRUG RESISTANCE PROTEIN Genomic Order:  2735
Name:  ? Seita.4G273500 Secondary Identifier:  ? PAC:32707577
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.4G273500 0.5kb upstream 0.5kb upstream 7270 true scaffold_4: 39061388-39068657 Setaria italica
Seita.4G273500 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 39068158-39068657 Setaria italica
Seita.4G273500 0.5kb downstream 0.5kb downstream 7270 true scaffold_4: 39060888-39068157 Setaria italica
Seita.4G273500 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 39060888-39061387 Setaria italica
Seita.4G273500 1.0kb upstream 1.0kb upstream 7770 true scaffold_4: 39061388-39069157 Setaria italica
Seita.4G273500 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 39068158-39069157 Setaria italica
Seita.4G273500 1.0kb downstream 1.0kb downstream 7770 true scaffold_4: 39060388-39068157 Setaria italica
Seita.4G273500 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 39060388-39061387 Setaria italica
Seita.4G273500 2.0kb upstream 2.0kb upstream 8770 true scaffold_4: 39061388-39070157 Setaria italica
Seita.4G273500 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 39068158-39070157 Setaria italica
Seita.4G273500 2.0kb downstream 2.0kb downstream 8770 true scaffold_4: 39059388-39068157 Setaria italica
Seita.4G273500 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 39059388-39061387 Setaria italica
Seita.4G273500 5.0kb upstream 5.0kb upstream 11770 true scaffold_4: 39061388-39073157 Setaria italica
Seita.4G273500 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 39068158-39073157 Setaria italica
Seita.4G273500 5.0kb downstream 5.0kb downstream 11770 true scaffold_4: 39056388-39068157 Setaria italica
Seita.4G273500 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 39056388-39061387 Setaria italica
Seita.4G273500 10.0kb upstream 10.0kb upstream 16770 true scaffold_4: 39061388-39078157 Setaria italica
Seita.4G273500 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 39068158-39078157 Setaria italica
Seita.4G273500 10.0kb downstream 10.0kb downstream 16770 true scaffold_4: 39051388-39068157 Setaria italica
Seita.4G273500 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 39051388-39061387 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122019943 5273 Angiosperm View MSA
122186593 5267 Panicoideae View MSA
124575680 5269 Grass View MSA
121290049 5274 Embryophyte View MSA
123328323 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.301        
cufflinks 0.154       Low
cufflinks 0.155       Low
cufflinks 0.176        
cufflinks 0.201        
cufflinks 0.195        
cufflinks 0.243        
cufflinks 0.245        
cufflinks 0.208        
cufflinks 0.224     Low  
cufflinks 0.244        
cufflinks 0.275        
cufflinks 0.346       High
cufflinks 0.13       Low
cufflinks 0.353       High
cufflinks 0.247        
cufflinks 0.392       High
cufflinks 0.258        
cufflinks 0.109       Low
cufflinks 0.261        

0 Strain