Gene : Seita.4G278700 S. italica v2.2
Defline:  (1 of 1) PTHR12868 - NADH-UBIQUINONE OXIDOREDUCTASE B22 SUBUNIT Genomic Order:  2787
Name:  ? Seita.4G278700 Secondary Identifier:  ? PAC:32709249
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.4G278700 0.5kb upstream 0.5kb upstream 2617 true scaffold_4: 39437798-39440414 Setaria italica
Seita.4G278700 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 39439915-39440414 Setaria italica
Seita.4G278700 0.5kb downstream 0.5kb downstream 2617 true scaffold_4: 39437298-39439914 Setaria italica
Seita.4G278700 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 39437298-39437797 Setaria italica
Seita.4G278700 1.0kb upstream 1.0kb upstream 3117 true scaffold_4: 39437798-39440914 Setaria italica
Seita.4G278700 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 39439915-39440914 Setaria italica
Seita.4G278700 1.0kb downstream 1.0kb downstream 3117 true scaffold_4: 39436798-39439914 Setaria italica
Seita.4G278700 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 39436798-39437797 Setaria italica
Seita.4G278700 2.0kb upstream 2.0kb upstream 4117 true scaffold_4: 39437798-39441914 Setaria italica
Seita.4G278700 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 39439915-39441914 Setaria italica
Seita.4G278700 2.0kb downstream 2.0kb downstream 4117 true scaffold_4: 39435798-39439914 Setaria italica
Seita.4G278700 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 39435798-39437797 Setaria italica
Seita.4G278700 5.0kb upstream 5.0kb upstream 7117 true scaffold_4: 39437798-39444914 Setaria italica
Seita.4G278700 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 39439915-39444914 Setaria italica
Seita.4G278700 5.0kb downstream 5.0kb downstream 7117 true scaffold_4: 39432798-39439914 Setaria italica
Seita.4G278700 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 39432798-39437797 Setaria italica
Seita.4G278700 10.0kb upstream 10.0kb upstream 12117 true scaffold_4: 39437798-39449914 Setaria italica
Seita.4G278700 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 39439915-39449914 Setaria italica
Seita.4G278700 10.0kb downstream 10.0kb downstream 12117 true scaffold_4: 39427798-39439914 Setaria italica
Seita.4G278700 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 39427798-39437797 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122190673 5267 Panicoideae View MSA
124573782 5269 Grass View MSA
122043001 5273 Angiosperm View MSA
121348732 5274 Embryophyte View MSA
123424922 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.35     High  
cufflinks 30.643     High  
cufflinks 8.506       Low
cufflinks 11.748     High  
cufflinks 11.015     High  
cufflinks 26.304     High  
cufflinks 12.318        
cufflinks 33.998     High  
cufflinks 18.116     High  
cufflinks 60.069     High High
cufflinks 18.393     High  
cufflinks 23.293     High  
cufflinks 38.394     High High
cufflinks 17.343     High  
cufflinks 26.048     High  
cufflinks 7.383       Low
cufflinks 37.136     High High
cufflinks 4.64       Low
cufflinks 12.538     High  
cufflinks 34.844     High  

0 Strain