Gene : Seita.4G287100 S. italica v2.2
Defline:  (1 of 4) PF13704 - Glycosyl transferase family 2 (Glyco_tranf_2_4) Genomic Order:  2871
Name:  ? Seita.4G287100 Secondary Identifier:  ? PAC:32708961
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.4G287100 0.5kb upstream 0.5kb upstream 2504 true scaffold_4: 39966360-39968863 Setaria italica
Seita.4G287100 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 39966360-39966859 Setaria italica
Seita.4G287100 0.5kb downstream 0.5kb downstream 2504 true scaffold_4: 39966860-39969363 Setaria italica
Seita.4G287100 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 39968864-39969363 Setaria italica
Seita.4G287100 1.0kb upstream 1.0kb upstream 3004 true scaffold_4: 39965860-39968863 Setaria italica
Seita.4G287100 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 39965860-39966859 Setaria italica
Seita.4G287100 1.0kb downstream 1.0kb downstream 3004 true scaffold_4: 39966860-39969863 Setaria italica
Seita.4G287100 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 39968864-39969863 Setaria italica
Seita.4G287100 2.0kb upstream 2.0kb upstream 4004 true scaffold_4: 39964860-39968863 Setaria italica
Seita.4G287100 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 39964860-39966859 Setaria italica
Seita.4G287100 2.0kb downstream 2.0kb downstream 4004 true scaffold_4: 39966860-39970863 Setaria italica
Seita.4G287100 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 39968864-39970863 Setaria italica
Seita.4G287100 5.0kb upstream 5.0kb upstream 7004 true scaffold_4: 39961860-39968863 Setaria italica
Seita.4G287100 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 39961860-39966859 Setaria italica
Seita.4G287100 5.0kb downstream 5.0kb downstream 7004 true scaffold_4: 39966860-39973863 Setaria italica
Seita.4G287100 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 39968864-39973863 Setaria italica
Seita.4G287100 10.0kb upstream 10.0kb upstream 12004 true scaffold_4: 39956860-39968863 Setaria italica
Seita.4G287100 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 39956860-39966859 Setaria italica
Seita.4G287100 10.0kb downstream 10.0kb downstream 12004 true scaffold_4: 39966860-39978863 Setaria italica
Seita.4G287100 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 39968864-39978863 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187395 5267 Panicoideae View MSA
124585886 5269 Grass View MSA
122042100 5273 Angiosperm View MSA
123428981 5275 Viridiplantae View MSA
121349408 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.191        
cufflinks 0.134        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low Low
cufflinks 0.037     Low Low
cufflinks 0.098     Low  
cufflinks 0.122        
cufflinks 0.041     Low  
cufflinks 0.063     Low  
cufflinks 0.493       High
cufflinks 0.602       High
cufflinks 0.627       High
cufflinks 0.234        
cufflinks 0.078     Low  
cufflinks 0.176        
cufflinks 0.039     Low Low
cufflinks 0.2        
cufflinks 0.074     Low  
cufflinks 0.042     Low  
cufflinks 0.427       High

0 Strain