Gene : Seita.4G290700 S. italica v2.2
Defline:  (1 of 1) PTHR34284:SF1 - FG-GAP REPEAT-CONTAINING PROTEIN Genomic Order:  2907
Name:  ? Seita.4G290700 Secondary Identifier:  ? PAC:32707429
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.4G290700 0.5kb upstream 0.5kb upstream 5093 true scaffold_4: 40153808-40158900 Setaria italica
Seita.4G290700 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 40158401-40158900 Setaria italica
Seita.4G290700 0.5kb downstream 0.5kb downstream 5093 true scaffold_4: 40153308-40158400 Setaria italica
Seita.4G290700 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 40153308-40153807 Setaria italica
Seita.4G290700 1.0kb upstream 1.0kb upstream 5593 true scaffold_4: 40153808-40159400 Setaria italica
Seita.4G290700 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 40158401-40159400 Setaria italica
Seita.4G290700 1.0kb downstream 1.0kb downstream 5593 true scaffold_4: 40152808-40158400 Setaria italica
Seita.4G290700 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 40152808-40153807 Setaria italica
Seita.4G290700 2.0kb upstream 2.0kb upstream 6593 true scaffold_4: 40153808-40160400 Setaria italica
Seita.4G290700 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 40158401-40160400 Setaria italica
Seita.4G290700 2.0kb downstream 2.0kb downstream 6593 true scaffold_4: 40151808-40158400 Setaria italica
Seita.4G290700 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 40151808-40153807 Setaria italica
Seita.4G290700 5.0kb upstream 5.0kb upstream 9593 true scaffold_4: 40153808-40163400 Setaria italica
Seita.4G290700 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 40158401-40163400 Setaria italica
Seita.4G290700 5.0kb downstream 5.0kb downstream 9593 true scaffold_4: 40148808-40158400 Setaria italica
Seita.4G290700 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 40148808-40153807 Setaria italica
Seita.4G290700 10.0kb upstream 10.0kb upstream 14593 true scaffold_4: 40153808-40168400 Setaria italica
Seita.4G290700 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 40158401-40168400 Setaria italica
Seita.4G290700 10.0kb downstream 10.0kb downstream 14593 true scaffold_4: 40143808-40158400 Setaria italica
Seita.4G290700 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 40143808-40153807 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181793 5267 Panicoideae View MSA
124576385 5269 Grass View MSA
122042387 5273 Angiosperm View MSA
121346103 5274 Embryophyte View MSA
123425546 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 35.84     High High
cufflinks 32.708     High High
cufflinks 16.058     High Low
cufflinks 17.274     High Low
cufflinks 19.249     High  
cufflinks 32.424     High High
cufflinks 22.36     High  
cufflinks 19.759     High  
cufflinks 22.56     High  
cufflinks 24.845     High  
cufflinks 30.568     High  
cufflinks 26.967     High  
cufflinks 26.453     High  
cufflinks 16.129     High Low
cufflinks 30.48     High  
cufflinks 21.908     High  
cufflinks 29.357     High  
cufflinks 20.968     High  
cufflinks 16.744     High Low
cufflinks 32.716     High High

0 Strain