Gene : Seita.5G091400 S. italica v2.2
Defline:  (1 of 48) 2.7.10.1//2.7.11.1 - Receptor protein-tyrosine kinase / Receptor protein tyrosine kinase // Non-specific serine/threonine protein kinase / Threonine-specific protein kinase Genomic Order:  914
Name:  ? Seita.5G091400 Secondary Identifier:  ? PAC:32680854
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.5G091400 0.5kb upstream 0.5kb upstream 3532 true scaffold_5: 7801301-7804832 Setaria italica
Seita.5G091400 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 7801301-7801800 Setaria italica
Seita.5G091400 0.5kb downstream 0.5kb downstream 3532 true scaffold_5: 7801801-7805332 Setaria italica
Seita.5G091400 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 7804833-7805332 Setaria italica
Seita.5G091400 1.0kb upstream 1.0kb upstream 4032 true scaffold_5: 7800801-7804832 Setaria italica
Seita.5G091400 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 7800801-7801800 Setaria italica
Seita.5G091400 1.0kb downstream 1.0kb downstream 4032 true scaffold_5: 7801801-7805832 Setaria italica
Seita.5G091400 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 7804833-7805832 Setaria italica
Seita.5G091400 2.0kb upstream 2.0kb upstream 5032 true scaffold_5: 7799801-7804832 Setaria italica
Seita.5G091400 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 7799801-7801800 Setaria italica
Seita.5G091400 2.0kb downstream 2.0kb downstream 5032 true scaffold_5: 7801801-7806832 Setaria italica
Seita.5G091400 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 7804833-7806832 Setaria italica
Seita.5G091400 5.0kb upstream 5.0kb upstream 8032 true scaffold_5: 7796801-7804832 Setaria italica
Seita.5G091400 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 7796801-7801800 Setaria italica
Seita.5G091400 5.0kb downstream 5.0kb downstream 8032 true scaffold_5: 7801801-7809832 Setaria italica
Seita.5G091400 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 7804833-7809832 Setaria italica
Seita.5G091400 10.0kb upstream 10.0kb upstream 13032 true scaffold_5: 7791801-7804832 Setaria italica
Seita.5G091400 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 7791801-7801800 Setaria italica
Seita.5G091400 10.0kb downstream 10.0kb downstream 13032 true scaffold_5: 7801801-7814832 Setaria italica
Seita.5G091400 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 7804833-7814832 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187955 5267 Panicoideae View MSA
124572513 5269 Grass View MSA
122046324 5273 Angiosperm View MSA
121348254 5274 Embryophyte View MSA
123380793 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.044        
cufflinks 9.514       High
cufflinks 0.046     Low Low
cufflinks 0.228        
cufflinks 0.425        
cufflinks 12.693       High
cufflinks 2.543        
cufflinks 1.913        
cufflinks 1.483        
cufflinks 2.193        
cufflinks 1.23        
cufflinks 0.218        
cufflinks 0.418        
cufflinks 0.01     Low Low
cufflinks 0.37        
cufflinks 1.6        
cufflinks 0.413        
cufflinks 0.225        
cufflinks 0.06     Low Low
cufflinks 0.569        

0 Strain