Gene : Seita.5G090900 S. italica v2.2
Defline:  (1 of 1) PTHR23500:SF118 - PLASTIDIC GLUCOSE TRANSPORTER 4 Genomic Order:  909
Name:  ? Seita.5G090900 Secondary Identifier:  ? PAC:32685920
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.5G090900 0.5kb upstream 0.5kb upstream 6334 true scaffold_5: 7754571-7760904 Setaria italica
Seita.5G090900 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 7754571-7755070 Setaria italica
Seita.5G090900 0.5kb downstream 0.5kb downstream 6334 true scaffold_5: 7755071-7761404 Setaria italica
Seita.5G090900 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 7760905-7761404 Setaria italica
Seita.5G090900 1.0kb upstream 1.0kb upstream 6834 true scaffold_5: 7754071-7760904 Setaria italica
Seita.5G090900 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 7754071-7755070 Setaria italica
Seita.5G090900 1.0kb downstream 1.0kb downstream 6834 true scaffold_5: 7755071-7761904 Setaria italica
Seita.5G090900 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 7760905-7761904 Setaria italica
Seita.5G090900 2.0kb upstream 2.0kb upstream 7834 true scaffold_5: 7753071-7760904 Setaria italica
Seita.5G090900 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 7753071-7755070 Setaria italica
Seita.5G090900 2.0kb downstream 2.0kb downstream 7834 true scaffold_5: 7755071-7762904 Setaria italica
Seita.5G090900 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 7760905-7762904 Setaria italica
Seita.5G090900 5.0kb upstream 5.0kb upstream 10834 true scaffold_5: 7750071-7760904 Setaria italica
Seita.5G090900 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 7750071-7755070 Setaria italica
Seita.5G090900 5.0kb downstream 5.0kb downstream 10834 true scaffold_5: 7755071-7765904 Setaria italica
Seita.5G090900 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 7760905-7765904 Setaria italica
Seita.5G090900 10.0kb upstream 10.0kb upstream 15834 true scaffold_5: 7745071-7760904 Setaria italica
Seita.5G090900 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 7745071-7755070 Setaria italica
Seita.5G090900 10.0kb downstream 10.0kb downstream 15834 true scaffold_5: 7755071-7770904 Setaria italica
Seita.5G090900 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 7760905-7770904 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122196773 5267 Panicoideae View MSA
124589644 5269 Grass View MSA
122042850 5273 Angiosperm View MSA
121344868 5274 Embryophyte View MSA
123426290 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.921     High  
cufflinks 15.31     High Low
cufflinks 39.506     High High
cufflinks 42.62     High High
cufflinks 36.401     High High
cufflinks 13.933     High Low
cufflinks 23.025     High  
cufflinks 19.168     High  
cufflinks 29.39     High  
cufflinks 19.97     High  
cufflinks 21.243     High  
cufflinks 23.243     High  
cufflinks 32.128     High High
cufflinks 22.557     High  
cufflinks 19.113     High  
cufflinks 20.715     High  
cufflinks 22.971     High  
cufflinks 22.14     High  
cufflinks 28.031     High  
cufflinks 21.908     High  

0 Strain