Gene : Seita.5G179700 S. italica v2.2
Defline:  (1 of 1) PTHR24115:SF509 - KINESIN-LIKE PROTEIN NACK2 Genomic Order:  1797
Name:  ? Seita.5G179700 Secondary Identifier:  ? PAC:32682779
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.5G179700 0.5kb upstream 0.5kb upstream 7286 true scaffold_5: 21856008-21863293 Setaria italica
Seita.5G179700 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 21862794-21863293 Setaria italica
Seita.5G179700 0.5kb downstream 0.5kb downstream 7286 true scaffold_5: 21855508-21862793 Setaria italica
Seita.5G179700 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 21855508-21856007 Setaria italica
Seita.5G179700 1.0kb upstream 1.0kb upstream 7786 true scaffold_5: 21856008-21863793 Setaria italica
Seita.5G179700 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 21862794-21863793 Setaria italica
Seita.5G179700 1.0kb downstream 1.0kb downstream 7786 true scaffold_5: 21855008-21862793 Setaria italica
Seita.5G179700 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 21855008-21856007 Setaria italica
Seita.5G179700 2.0kb upstream 2.0kb upstream 8786 true scaffold_5: 21856008-21864793 Setaria italica
Seita.5G179700 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 21862794-21864793 Setaria italica
Seita.5G179700 2.0kb downstream 2.0kb downstream 8786 true scaffold_5: 21854008-21862793 Setaria italica
Seita.5G179700 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 21854008-21856007 Setaria italica
Seita.5G179700 5.0kb upstream 5.0kb upstream 11786 true scaffold_5: 21856008-21867793 Setaria italica
Seita.5G179700 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 21862794-21867793 Setaria italica
Seita.5G179700 5.0kb downstream 5.0kb downstream 11786 true scaffold_5: 21851008-21862793 Setaria italica
Seita.5G179700 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 21851008-21856007 Setaria italica
Seita.5G179700 10.0kb upstream 10.0kb upstream 16786 true scaffold_5: 21856008-21872793 Setaria italica
Seita.5G179700 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 21862794-21872793 Setaria italica
Seita.5G179700 10.0kb downstream 10.0kb downstream 16786 true scaffold_5: 21846008-21862793 Setaria italica
Seita.5G179700 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 21846008-21856007 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180750 5267 Panicoideae View MSA
124579254 5269 Grass View MSA
122046602 5273 Angiosperm View MSA
121344797 5274 Embryophyte View MSA
123380101 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.179        
cufflinks 2.022        
cufflinks 0.004     Low Low
cufflinks 0.01     Low Low
cufflinks 0.006     Low Low
cufflinks 2.085        
cufflinks 1.553        
cufflinks 2.438        
cufflinks 1.207        
cufflinks 0.901        
cufflinks 1.448        
cufflinks 1.405        
cufflinks 0.582        
cufflinks 0.009     Low Low
cufflinks 2.488        
cufflinks 0.131        
cufflinks 1.721        
cufflinks 0.077     Low  
cufflinks 0.178        
cufflinks 2.323        

0 Strain