Gene : Seita.5G181500 S. italica v2.2
Defline:  (1 of 1) 2.4.1.227 - Undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase / Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase Genomic Order:  1815
Name:  ? Seita.5G181500 Secondary Identifier:  ? PAC:32682819
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.5G181500 0.5kb upstream 0.5kb upstream 5846 true scaffold_5: 22559940-22565785 Setaria italica
Seita.5G181500 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 22565286-22565785 Setaria italica
Seita.5G181500 0.5kb downstream 0.5kb downstream 5846 true scaffold_5: 22559440-22565285 Setaria italica
Seita.5G181500 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 22559440-22559939 Setaria italica
Seita.5G181500 1.0kb upstream 1.0kb upstream 6346 true scaffold_5: 22559940-22566285 Setaria italica
Seita.5G181500 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 22565286-22566285 Setaria italica
Seita.5G181500 1.0kb downstream 1.0kb downstream 6346 true scaffold_5: 22558940-22565285 Setaria italica
Seita.5G181500 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 22558940-22559939 Setaria italica
Seita.5G181500 2.0kb upstream 2.0kb upstream 7346 true scaffold_5: 22559940-22567285 Setaria italica
Seita.5G181500 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 22565286-22567285 Setaria italica
Seita.5G181500 2.0kb downstream 2.0kb downstream 7346 true scaffold_5: 22557940-22565285 Setaria italica
Seita.5G181500 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 22557940-22559939 Setaria italica
Seita.5G181500 5.0kb upstream 5.0kb upstream 10346 true scaffold_5: 22559940-22570285 Setaria italica
Seita.5G181500 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 22565286-22570285 Setaria italica
Seita.5G181500 5.0kb downstream 5.0kb downstream 10346 true scaffold_5: 22554940-22565285 Setaria italica
Seita.5G181500 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 22554940-22559939 Setaria italica
Seita.5G181500 10.0kb upstream 10.0kb upstream 15346 true scaffold_5: 22559940-22575285 Setaria italica
Seita.5G181500 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 22565286-22575285 Setaria italica
Seita.5G181500 10.0kb downstream 10.0kb downstream 15346 true scaffold_5: 22549940-22565285 Setaria italica
Seita.5G181500 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 22549940-22559939 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175520 5267 Panicoideae View MSA
124577483 5269 Grass View MSA
122044486 5273 Angiosperm View MSA
121346404 5274 Embryophyte View MSA
123426309 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.943        
cufflinks 5.002       High
cufflinks 0.718       Low
cufflinks 0.502       Low
cufflinks 0.49       Low
cufflinks 4.868       High
cufflinks 2.244        
cufflinks 1.731        
cufflinks 0.769        
cufflinks 2.633        
cufflinks 2.388        
cufflinks 2.492        
cufflinks 1.89        
cufflinks 0.692       Low
cufflinks 3.437        
cufflinks 1.641        
cufflinks 4.147       High
cufflinks 0.677       Low
cufflinks 0.608       Low
cufflinks 4.005       High

0 Strain