Gene : Seita.5G152500 S. italica v2.2
Defline:  (1 of 2) PTHR11362//PTHR11362:SF21 - PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN Genomic Order:  1525
Name:  ? Seita.5G152500 Secondary Identifier:  ? PAC:32682082
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.5G152500 0.5kb upstream 0.5kb upstream 7976 true scaffold_5: 13578334-13586309 Setaria italica
Seita.5G152500 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 13578334-13578833 Setaria italica
Seita.5G152500 0.5kb downstream 0.5kb downstream 7976 true scaffold_5: 13578834-13586809 Setaria italica
Seita.5G152500 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 13586310-13586809 Setaria italica
Seita.5G152500 1.0kb upstream 1.0kb upstream 8476 true scaffold_5: 13577834-13586309 Setaria italica
Seita.5G152500 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 13577834-13578833 Setaria italica
Seita.5G152500 1.0kb downstream 1.0kb downstream 8476 true scaffold_5: 13578834-13587309 Setaria italica
Seita.5G152500 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 13586310-13587309 Setaria italica
Seita.5G152500 2.0kb upstream 2.0kb upstream 9476 true scaffold_5: 13576834-13586309 Setaria italica
Seita.5G152500 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 13576834-13578833 Setaria italica
Seita.5G152500 2.0kb downstream 2.0kb downstream 9476 true scaffold_5: 13578834-13588309 Setaria italica
Seita.5G152500 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 13586310-13588309 Setaria italica
Seita.5G152500 5.0kb upstream 5.0kb upstream 12476 true scaffold_5: 13573834-13586309 Setaria italica
Seita.5G152500 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 13573834-13578833 Setaria italica
Seita.5G152500 5.0kb downstream 5.0kb downstream 12476 true scaffold_5: 13578834-13591309 Setaria italica
Seita.5G152500 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 13586310-13591309 Setaria italica
Seita.5G152500 10.0kb upstream 10.0kb upstream 17476 true scaffold_5: 13568834-13586309 Setaria italica
Seita.5G152500 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 13568834-13578833 Setaria italica
Seita.5G152500 10.0kb downstream 10.0kb downstream 17476 true scaffold_5: 13578834-13596309 Setaria italica
Seita.5G152500 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 13586310-13596309 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189286 5267 Panicoideae View MSA
124583697 5269 Grass View MSA
122044368 5273 Angiosperm View MSA
123429087 5275 Viridiplantae View MSA
121310284 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.03     Low  
cufflinks 0.544       High
cufflinks 0.003     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.649       High
cufflinks 0.004     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.174       High
cufflinks 0.045     Low  
cufflinks 0.045     Low  
cufflinks 0.003     Low Low
cufflinks 0.019     Low  
cufflinks 0.049     Low  
cufflinks 0.031     Low  
cufflinks 0.01     Low  
cufflinks 0.016     Low  

0 Strain