Gene : Seita.5G160100 S. italica v2.2
Defline:  (1 of 2) PTHR18929//PTHR18929:SF91 - PROTEIN DISULFIDE ISOMERASE Genomic Order:  1601
Name:  ? Seita.5G160100 Secondary Identifier:  ? PAC:32684645
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.5G160100 0.5kb upstream 0.5kb upstream 3919 true scaffold_5: 15088751-15092669 Setaria italica
Seita.5G160100 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 15088751-15089250 Setaria italica
Seita.5G160100 0.5kb downstream 0.5kb downstream 3919 true scaffold_5: 15089251-15093169 Setaria italica
Seita.5G160100 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 15092670-15093169 Setaria italica
Seita.5G160100 1.0kb upstream 1.0kb upstream 4419 true scaffold_5: 15088251-15092669 Setaria italica
Seita.5G160100 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 15088251-15089250 Setaria italica
Seita.5G160100 1.0kb downstream 1.0kb downstream 4419 true scaffold_5: 15089251-15093669 Setaria italica
Seita.5G160100 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 15092670-15093669 Setaria italica
Seita.5G160100 2.0kb upstream 2.0kb upstream 5419 true scaffold_5: 15087251-15092669 Setaria italica
Seita.5G160100 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 15087251-15089250 Setaria italica
Seita.5G160100 2.0kb downstream 2.0kb downstream 5419 true scaffold_5: 15089251-15094669 Setaria italica
Seita.5G160100 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 15092670-15094669 Setaria italica
Seita.5G160100 5.0kb upstream 5.0kb upstream 8419 true scaffold_5: 15084251-15092669 Setaria italica
Seita.5G160100 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 15084251-15089250 Setaria italica
Seita.5G160100 5.0kb downstream 5.0kb downstream 8419 true scaffold_5: 15089251-15097669 Setaria italica
Seita.5G160100 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 15092670-15097669 Setaria italica
Seita.5G160100 10.0kb upstream 10.0kb upstream 13419 true scaffold_5: 15079251-15092669 Setaria italica
Seita.5G160100 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 15079251-15089250 Setaria italica
Seita.5G160100 10.0kb downstream 10.0kb downstream 13419 true scaffold_5: 15089251-15102669 Setaria italica
Seita.5G160100 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 15092670-15102669 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122195488 5267 Panicoideae View MSA
124578746 5269 Grass View MSA
122044773 5273 Angiosperm View MSA
121343999 5274 Embryophyte View MSA
123428832 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 45.842     High  
cufflinks 70.407     High High
cufflinks 25.658     High Low
cufflinks 19.087     High Low
cufflinks 17.556     High Low
cufflinks 59.487     High  
cufflinks 34.913     High  
cufflinks 47.513     High  
cufflinks 31.004     High  
cufflinks 49.273     High  
cufflinks 50.231     High  
cufflinks 66.638     High High
cufflinks 45.212     High  
cufflinks 44.162     High  
cufflinks 72.838     High High
cufflinks 19.594     High Low
cufflinks 77.2     High High
cufflinks 27.645     High  
cufflinks 34.219     High  
cufflinks 76.543     High High

0 Strain