Gene : Seita.5G233200 S. italica v2.2
Defline:  (1 of 36) 3.6.4.4 - Plus-end-directed kinesin ATPase / Kinesin Genomic Order:  2332
Name:  ? Seita.5G233200 Secondary Identifier:  ? PAC:32683424
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.5G233200 0.5kb upstream 0.5kb upstream 4741 true scaffold_5: 29532104-29536844 Setaria italica
Seita.5G233200 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 29532104-29532603 Setaria italica
Seita.5G233200 0.5kb downstream 0.5kb downstream 4741 true scaffold_5: 29532604-29537344 Setaria italica
Seita.5G233200 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 29536845-29537344 Setaria italica
Seita.5G233200 1.0kb upstream 1.0kb upstream 5241 true scaffold_5: 29531604-29536844 Setaria italica
Seita.5G233200 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 29531604-29532603 Setaria italica
Seita.5G233200 1.0kb downstream 1.0kb downstream 5241 true scaffold_5: 29532604-29537844 Setaria italica
Seita.5G233200 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 29536845-29537844 Setaria italica
Seita.5G233200 2.0kb upstream 2.0kb upstream 6241 true scaffold_5: 29530604-29536844 Setaria italica
Seita.5G233200 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 29530604-29532603 Setaria italica
Seita.5G233200 2.0kb downstream 2.0kb downstream 6241 true scaffold_5: 29532604-29538844 Setaria italica
Seita.5G233200 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 29536845-29538844 Setaria italica
Seita.5G233200 5.0kb upstream 5.0kb upstream 9241 true scaffold_5: 29527604-29536844 Setaria italica
Seita.5G233200 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 29527604-29532603 Setaria italica
Seita.5G233200 5.0kb downstream 5.0kb downstream 9241 true scaffold_5: 29532604-29541844 Setaria italica
Seita.5G233200 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 29536845-29541844 Setaria italica
Seita.5G233200 10.0kb upstream 10.0kb upstream 14241 true scaffold_5: 29522604-29536844 Setaria italica
Seita.5G233200 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 29522604-29532603 Setaria italica
Seita.5G233200 10.0kb downstream 10.0kb downstream 14241 true scaffold_5: 29532604-29546844 Setaria italica
Seita.5G233200 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 29536845-29546844 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180761 5267 Panicoideae View MSA
124573863 5269 Grass View MSA
122043323 5273 Angiosperm View MSA
121350161 5274 Embryophyte View MSA
123426877 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.884        
cufflinks 18.313     High High
cufflinks 0.42       Low
cufflinks 1.895        
cufflinks 6.241        
cufflinks 17.163     High High
cufflinks 7.706        
cufflinks 9.935        
cufflinks 11.722        
cufflinks 5.649        
cufflinks 7.58        
cufflinks 6.124        
cufflinks 13.372        
cufflinks 0.311       Low
cufflinks 8.062        
cufflinks 4.207        
cufflinks 6.723        
cufflinks 0.822       Low
cufflinks 0.863       Low
cufflinks 8.292        

0 Strain