Gene : Seita.5G302300 S. italica v2.2
Defline:  (1 of 1) PTHR19241:SF224 - ABC TRANSPORTER G FAMILY MEMBER 35-RELATED Genomic Order:  3023
Name:  ? Seita.5G302300 Secondary Identifier:  ? PAC:32684428
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.5G302300 0.5kb upstream 0.5kb upstream 10176 true scaffold_5: 35633236-35643411 Setaria italica
Seita.5G302300 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 35633236-35633735 Setaria italica
Seita.5G302300 0.5kb downstream 0.5kb downstream 10176 true scaffold_5: 35633736-35643911 Setaria italica
Seita.5G302300 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 35643412-35643911 Setaria italica
Seita.5G302300 1.0kb upstream 1.0kb upstream 10676 true scaffold_5: 35632736-35643411 Setaria italica
Seita.5G302300 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 35632736-35633735 Setaria italica
Seita.5G302300 1.0kb downstream 1.0kb downstream 10676 true scaffold_5: 35633736-35644411 Setaria italica
Seita.5G302300 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 35643412-35644411 Setaria italica
Seita.5G302300 2.0kb upstream 2.0kb upstream 11676 true scaffold_5: 35631736-35643411 Setaria italica
Seita.5G302300 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 35631736-35633735 Setaria italica
Seita.5G302300 2.0kb downstream 2.0kb downstream 11676 true scaffold_5: 35633736-35645411 Setaria italica
Seita.5G302300 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 35643412-35645411 Setaria italica
Seita.5G302300 5.0kb upstream 5.0kb upstream 14676 true scaffold_5: 35628736-35643411 Setaria italica
Seita.5G302300 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 35628736-35633735 Setaria italica
Seita.5G302300 5.0kb downstream 5.0kb downstream 14676 true scaffold_5: 35633736-35648411 Setaria italica
Seita.5G302300 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 35643412-35648411 Setaria italica
Seita.5G302300 10.0kb upstream 10.0kb upstream 19676 true scaffold_5: 35623736-35643411 Setaria italica
Seita.5G302300 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 35623736-35633735 Setaria italica
Seita.5G302300 10.0kb downstream 10.0kb downstream 19676 true scaffold_5: 35633736-35653411 Setaria italica
Seita.5G302300 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 35643412-35653411 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181197 5267 Panicoideae View MSA
124569720 5269 Grass View MSA
122047609 5273 Angiosperm View MSA
123428903 5275 Viridiplantae View MSA
121351020 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.699        
cufflinks 1.444        
cufflinks 0.533        
cufflinks 0.253       Low
cufflinks 0.24       Low
cufflinks 1.016        
cufflinks 1.069        
cufflinks 0.644        
cufflinks 0.428        
cufflinks 0.844        
cufflinks 1.41        
cufflinks 1.302        
cufflinks 1.244        
cufflinks 0.936        
cufflinks 8.872       High
cufflinks 0.794        
cufflinks 1.459        
cufflinks 0.584        
cufflinks 0.375       Low
cufflinks 3.528       High

0 Strain