Gene : Seita.5G305800 S. italica v2.2
Defline:  (1 of 2) PTHR24078:SF255 - DNAJ HOMOLOG DNJ-5 Genomic Order:  3058
Name:  ? Seita.5G305800 Secondary Identifier:  ? PAC:32682632
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.5G305800 0.5kb upstream 0.5kb upstream 3232 true scaffold_5: 35923997-35927228 Setaria italica
Seita.5G305800 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 35923997-35924496 Setaria italica
Seita.5G305800 0.5kb downstream 0.5kb downstream 3232 true scaffold_5: 35924497-35927728 Setaria italica
Seita.5G305800 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 35927229-35927728 Setaria italica
Seita.5G305800 1.0kb upstream 1.0kb upstream 3732 true scaffold_5: 35923497-35927228 Setaria italica
Seita.5G305800 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 35923497-35924496 Setaria italica
Seita.5G305800 1.0kb downstream 1.0kb downstream 3732 true scaffold_5: 35924497-35928228 Setaria italica
Seita.5G305800 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 35927229-35928228 Setaria italica
Seita.5G305800 2.0kb upstream 2.0kb upstream 4732 true scaffold_5: 35922497-35927228 Setaria italica
Seita.5G305800 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 35922497-35924496 Setaria italica
Seita.5G305800 2.0kb downstream 2.0kb downstream 4732 true scaffold_5: 35924497-35929228 Setaria italica
Seita.5G305800 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 35927229-35929228 Setaria italica
Seita.5G305800 5.0kb upstream 5.0kb upstream 7732 true scaffold_5: 35919497-35927228 Setaria italica
Seita.5G305800 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 35919497-35924496 Setaria italica
Seita.5G305800 5.0kb downstream 5.0kb downstream 7732 true scaffold_5: 35924497-35932228 Setaria italica
Seita.5G305800 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 35927229-35932228 Setaria italica
Seita.5G305800 10.0kb upstream 10.0kb upstream 12732 true scaffold_5: 35914497-35927228 Setaria italica
Seita.5G305800 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 35914497-35924496 Setaria italica
Seita.5G305800 10.0kb downstream 10.0kb downstream 12732 true scaffold_5: 35924497-35937228 Setaria italica
Seita.5G305800 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 35927229-35937228 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180968 5267 Panicoideae View MSA
124575882 5269 Grass View MSA
122045316 5273 Angiosperm View MSA
121346965 5274 Embryophyte View MSA
123428421 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.166       Low
cufflinks 2.1        
cufflinks 169.234     High High
cufflinks 175.868     High High
cufflinks 117.513     High High
cufflinks 0.737        
cufflinks 22.422     High  
cufflinks 75.68     High High
cufflinks 20.197     High  
cufflinks 0.092     Low Low
cufflinks 0.099     Low Low
cufflinks 0.14       Low
cufflinks 0.331        
cufflinks 124.434     High High
cufflinks 0.329        
cufflinks 45.198     High  
cufflinks 0.193       Low
cufflinks 2.363        
cufflinks 111.451     High High
cufflinks 0.313        

0 Strain