Gene : Seita.5G310900 S. italica v2.2
Defline:  (1 of 1) PTHR12276//PTHR12276:SF59 - EPSIN/ENT-RELATED Genomic Order:  3109
Name:  ? Seita.5G310900 Secondary Identifier:  ? PAC:32681807
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.5G310900 0.5kb upstream 0.5kb upstream 4887 true scaffold_5: 36273975-36278861 Setaria italica
Seita.5G310900 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 36273975-36274474 Setaria italica
Seita.5G310900 0.5kb downstream 0.5kb downstream 4887 true scaffold_5: 36274475-36279361 Setaria italica
Seita.5G310900 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 36278862-36279361 Setaria italica
Seita.5G310900 1.0kb upstream 1.0kb upstream 5387 true scaffold_5: 36273475-36278861 Setaria italica
Seita.5G310900 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 36273475-36274474 Setaria italica
Seita.5G310900 1.0kb downstream 1.0kb downstream 5387 true scaffold_5: 36274475-36279861 Setaria italica
Seita.5G310900 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 36278862-36279861 Setaria italica
Seita.5G310900 2.0kb upstream 2.0kb upstream 6387 true scaffold_5: 36272475-36278861 Setaria italica
Seita.5G310900 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 36272475-36274474 Setaria italica
Seita.5G310900 2.0kb downstream 2.0kb downstream 6387 true scaffold_5: 36274475-36280861 Setaria italica
Seita.5G310900 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 36278862-36280861 Setaria italica
Seita.5G310900 5.0kb upstream 5.0kb upstream 9387 true scaffold_5: 36269475-36278861 Setaria italica
Seita.5G310900 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 36269475-36274474 Setaria italica
Seita.5G310900 5.0kb downstream 5.0kb downstream 9387 true scaffold_5: 36274475-36283861 Setaria italica
Seita.5G310900 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 36278862-36283861 Setaria italica
Seita.5G310900 10.0kb upstream 10.0kb upstream 14387 true scaffold_5: 36264475-36278861 Setaria italica
Seita.5G310900 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 36264475-36274474 Setaria italica
Seita.5G310900 10.0kb downstream 10.0kb downstream 14387 true scaffold_5: 36274475-36288861 Setaria italica
Seita.5G310900 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 36278862-36288861 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122192060 5267 Panicoideae View MSA
124590574 5269 Grass View MSA
122049187 5273 Angiosperm View MSA
121349061 5274 Embryophyte View MSA
123428144 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.938        
cufflinks 0.395        
cufflinks 0.81        
cufflinks 0.774        
cufflinks 0.365       Low
cufflinks 0.271       Low
cufflinks 0.39        
cufflinks 0.503        
cufflinks 0.224       Low
cufflinks 0.796        
cufflinks 0.578        
cufflinks 1.474       High
cufflinks 0.527        
cufflinks 0.957        
cufflinks 0.926        
cufflinks 1.392       High
cufflinks 0.522        
cufflinks 2.741       High
cufflinks 1.81       High
cufflinks 0.626        

0 Strain