Gene : Seita.5G423900 S. italica v2.2
Defline:  (1 of 1) PTHR31140:SF1 - B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 Genomic Order:  4239
Name:  ? Seita.5G423900 Secondary Identifier:  ? PAC:32683105
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.5G423900 0.5kb upstream 0.5kb upstream 4057 true scaffold_5: 44493034-44497090 Setaria italica
Seita.5G423900 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 44496591-44497090 Setaria italica
Seita.5G423900 0.5kb downstream 0.5kb downstream 4057 true scaffold_5: 44492534-44496590 Setaria italica
Seita.5G423900 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 44492534-44493033 Setaria italica
Seita.5G423900 1.0kb upstream 1.0kb upstream 4557 true scaffold_5: 44493034-44497590 Setaria italica
Seita.5G423900 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 44496591-44497590 Setaria italica
Seita.5G423900 1.0kb downstream 1.0kb downstream 4557 true scaffold_5: 44492034-44496590 Setaria italica
Seita.5G423900 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 44492034-44493033 Setaria italica
Seita.5G423900 2.0kb upstream 2.0kb upstream 5557 true scaffold_5: 44493034-44498590 Setaria italica
Seita.5G423900 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 44496591-44498590 Setaria italica
Seita.5G423900 2.0kb downstream 2.0kb downstream 5557 true scaffold_5: 44491034-44496590 Setaria italica
Seita.5G423900 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 44491034-44493033 Setaria italica
Seita.5G423900 5.0kb upstream 5.0kb upstream 8557 true scaffold_5: 44493034-44501590 Setaria italica
Seita.5G423900 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 44496591-44501590 Setaria italica
Seita.5G423900 5.0kb downstream 5.0kb downstream 8557 true scaffold_5: 44488034-44496590 Setaria italica
Seita.5G423900 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 44488034-44493033 Setaria italica
Seita.5G423900 10.0kb upstream 10.0kb upstream 13557 true scaffold_5: 44493034-44506590 Setaria italica
Seita.5G423900 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 44496591-44506590 Setaria italica
Seita.5G423900 10.0kb downstream 10.0kb downstream 13557 true scaffold_5: 44483034-44496590 Setaria italica
Seita.5G423900 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 44483034-44493033 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182812 5267 Panicoideae View MSA
124582374 5269 Grass View MSA
122044257 5273 Angiosperm View MSA
121351416 5274 Embryophyte View MSA
123428387 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.024     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain