Gene : Seita.6G000700 S. italica v2.2
Defline:  (1 of 1) PTHR11040//PTHR11040:SF63 - ZINC/IRON TRANSPORTER Genomic Order:  7
Name:  ? Seita.6G000700 Secondary Identifier:  ? PAC:32700434
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.6G000700 0.5kb upstream 0.5kb upstream 6378 true scaffold_6: 88952-95329 Setaria italica
Seita.6G000700 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 94830-95329 Setaria italica
Seita.6G000700 0.5kb downstream 0.5kb downstream 6378 true scaffold_6: 88452-94829 Setaria italica
Seita.6G000700 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 88452-88951 Setaria italica
Seita.6G000700 1.0kb upstream 1.0kb upstream 6878 true scaffold_6: 88952-95829 Setaria italica
Seita.6G000700 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 94830-95829 Setaria italica
Seita.6G000700 1.0kb downstream 1.0kb downstream 6878 true scaffold_6: 87952-94829 Setaria italica
Seita.6G000700 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 87952-88951 Setaria italica
Seita.6G000700 2.0kb upstream 2.0kb upstream 7878 true scaffold_6: 88952-96829 Setaria italica
Seita.6G000700 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 94830-96829 Setaria italica
Seita.6G000700 2.0kb downstream 2.0kb downstream 7878 true scaffold_6: 86952-94829 Setaria italica
Seita.6G000700 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 86952-88951 Setaria italica
Seita.6G000700 5.0kb upstream 5.0kb upstream 10878 true scaffold_6: 88952-99829 Setaria italica
Seita.6G000700 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 94830-99829 Setaria italica
Seita.6G000700 5.0kb downstream 5.0kb downstream 10878 true scaffold_6: 83952-94829 Setaria italica
Seita.6G000700 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 83952-88951 Setaria italica
Seita.6G000700 10.0kb upstream 10.0kb upstream 15878 true scaffold_6: 88952-104829 Setaria italica
Seita.6G000700 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 94830-104829 Setaria italica
Seita.6G000700 10.0kb downstream 10.0kb downstream 15878 true scaffold_6: 78952-94829 Setaria italica
Seita.6G000700 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 78952-88951 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122195580 5267 Panicoideae View MSA
124589221 5269 Grass View MSA
122050500 5273 Angiosperm View MSA
121344991 5274 Embryophyte View MSA
123426288 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.405        
cufflinks 0.566        
cufflinks 0.052     Low Low
cufflinks 0.034     Low Low
cufflinks 0.056     Low Low
cufflinks 0.785        
cufflinks 0.817        
cufflinks 1.414        
cufflinks 1.314        
cufflinks 0.91        
cufflinks 1.533        
cufflinks 2.346        
cufflinks 3.219       High
cufflinks 0.028     Low Low
cufflinks 4.437       High
cufflinks 0.221        
cufflinks 2.985       High
cufflinks 0.14        
cufflinks 0.062     Low Low
cufflinks 2.168        

0 Strain