Gene : Seita.6G003400 S. italica v2.2
Defline:  (1 of 1) PTHR22883:SF74 - PROTEIN S-ACYLTRANSFERASE 9-RELATED Genomic Order:  34
Name:  ? Seita.6G003400 Secondary Identifier:  ? PAC:32699519
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.6G003400 0.5kb upstream 0.5kb upstream 4709 true scaffold_6: 244134-248842 Setaria italica
Seita.6G003400 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 248343-248842 Setaria italica
Seita.6G003400 0.5kb downstream 0.5kb downstream 4709 true scaffold_6: 243634-248342 Setaria italica
Seita.6G003400 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 243634-244133 Setaria italica
Seita.6G003400 1.0kb upstream 1.0kb upstream 5209 true scaffold_6: 244134-249342 Setaria italica
Seita.6G003400 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 248343-249342 Setaria italica
Seita.6G003400 1.0kb downstream 1.0kb downstream 5209 true scaffold_6: 243134-248342 Setaria italica
Seita.6G003400 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 243134-244133 Setaria italica
Seita.6G003400 2.0kb upstream 2.0kb upstream 6209 true scaffold_6: 244134-250342 Setaria italica
Seita.6G003400 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 248343-250342 Setaria italica
Seita.6G003400 2.0kb downstream 2.0kb downstream 6209 true scaffold_6: 242134-248342 Setaria italica
Seita.6G003400 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 242134-244133 Setaria italica
Seita.6G003400 5.0kb upstream 5.0kb upstream 9209 true scaffold_6: 244134-253342 Setaria italica
Seita.6G003400 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 248343-253342 Setaria italica
Seita.6G003400 5.0kb downstream 5.0kb downstream 9209 true scaffold_6: 239134-248342 Setaria italica
Seita.6G003400 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 239134-244133 Setaria italica
Seita.6G003400 10.0kb upstream 10.0kb upstream 14209 true scaffold_6: 244134-258342 Setaria italica
Seita.6G003400 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 248343-258342 Setaria italica
Seita.6G003400 10.0kb downstream 10.0kb downstream 14209 true scaffold_6: 234134-248342 Setaria italica
Seita.6G003400 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 234134-244133 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121993698 5273 Angiosperm View MSA
122195913 5267 Panicoideae View MSA
124580991 5269 Grass View MSA
123428988 5275 Viridiplantae View MSA
121263956 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.733       High
cufflinks 1.639        
cufflinks 0.961       Low
cufflinks 0.966       Low
cufflinks 0.87       Low
cufflinks 1.593        
cufflinks 1.946        
cufflinks 1.485        
cufflinks 1.219        
cufflinks 1.87        
cufflinks 3.803       High
cufflinks 1.661        
cufflinks 3.103       High
cufflinks 1.104        
cufflinks 1.364        
cufflinks 1.818        
cufflinks 1.538        
cufflinks 2.267        
cufflinks 1.279        
cufflinks 1.788        

0 Strain