Gene : Seita.6G007200 S. italica v2.2
Defline:  (1 of 3) PTHR23115:SF164 - EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 3 Genomic Order:  72
Name:  ? Seita.6G007200 Secondary Identifier:  ? PAC:32700181
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.6G007200 0.5kb upstream 0.5kb upstream 4551 true scaffold_6: 490785-495335 Setaria italica
Seita.6G007200 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 490785-491284 Setaria italica
Seita.6G007200 0.5kb downstream 0.5kb downstream 4551 true scaffold_6: 491285-495835 Setaria italica
Seita.6G007200 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 495336-495835 Setaria italica
Seita.6G007200 1.0kb upstream 1.0kb upstream 5051 true scaffold_6: 490285-495335 Setaria italica
Seita.6G007200 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 490285-491284 Setaria italica
Seita.6G007200 1.0kb downstream 1.0kb downstream 5051 true scaffold_6: 491285-496335 Setaria italica
Seita.6G007200 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 495336-496335 Setaria italica
Seita.6G007200 2.0kb upstream 2.0kb upstream 6051 true scaffold_6: 489285-495335 Setaria italica
Seita.6G007200 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 489285-491284 Setaria italica
Seita.6G007200 2.0kb downstream 2.0kb downstream 6051 true scaffold_6: 491285-497335 Setaria italica
Seita.6G007200 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 495336-497335 Setaria italica
Seita.6G007200 5.0kb upstream 5.0kb upstream 9051 true scaffold_6: 486285-495335 Setaria italica
Seita.6G007200 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 486285-491284 Setaria italica
Seita.6G007200 5.0kb downstream 5.0kb downstream 9051 true scaffold_6: 491285-500335 Setaria italica
Seita.6G007200 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 495336-500335 Setaria italica
Seita.6G007200 10.0kb upstream 10.0kb upstream 14051 true scaffold_6: 481285-495335 Setaria italica
Seita.6G007200 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 481285-491284 Setaria italica
Seita.6G007200 10.0kb downstream 10.0kb downstream 14051 true scaffold_6: 491285-505335 Setaria italica
Seita.6G007200 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 495336-505335 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122193144 5267 Panicoideae View MSA
124580433 5269 Grass View MSA
122045938 5273 Angiosperm View MSA
121345904 5274 Embryophyte View MSA
123426083 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.21     High  
cufflinks 20.427     High High
cufflinks 8.64       Low
cufflinks 5.826       Low
cufflinks 8.158       Low
cufflinks 20.662     High High
cufflinks 14.284     High  
cufflinks 16.264     High  
cufflinks 22.45     High High
cufflinks 15.335        
cufflinks 19.304     High  
cufflinks 13.916     High  
cufflinks 11.849        
cufflinks 11.942        
cufflinks 19.919     High  
cufflinks 8.787       Low
cufflinks 18.609     High  
cufflinks 7.729       Low
cufflinks 9.319        
cufflinks 19.482     High  

0 Strain