Gene : Seita.5G430200 S. italica v2.2
Defline:  (1 of 1) PTHR11566:SF75 - DYNAMIN-RELATED PROTEIN 3A-RELATED Genomic Order:  4302
Name:  ? Seita.5G430200 Secondary Identifier:  ? PAC:32685013
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.5G430200 0.5kb upstream 0.5kb upstream 8036 true scaffold_5: 44907619-44915654 Setaria italica
Seita.5G430200 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 44915155-44915654 Setaria italica
Seita.5G430200 0.5kb downstream 0.5kb downstream 8036 true scaffold_5: 44907119-44915154 Setaria italica
Seita.5G430200 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 44907119-44907618 Setaria italica
Seita.5G430200 1.0kb upstream 1.0kb upstream 8536 true scaffold_5: 44907619-44916154 Setaria italica
Seita.5G430200 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 44915155-44916154 Setaria italica
Seita.5G430200 1.0kb downstream 1.0kb downstream 8536 true scaffold_5: 44906619-44915154 Setaria italica
Seita.5G430200 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 44906619-44907618 Setaria italica
Seita.5G430200 2.0kb upstream 2.0kb upstream 9536 true scaffold_5: 44907619-44917154 Setaria italica
Seita.5G430200 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 44915155-44917154 Setaria italica
Seita.5G430200 2.0kb downstream 2.0kb downstream 9536 true scaffold_5: 44905619-44915154 Setaria italica
Seita.5G430200 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 44905619-44907618 Setaria italica
Seita.5G430200 5.0kb upstream 5.0kb upstream 12536 true scaffold_5: 44907619-44920154 Setaria italica
Seita.5G430200 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 44915155-44920154 Setaria italica
Seita.5G430200 5.0kb downstream 5.0kb downstream 12536 true scaffold_5: 44902619-44915154 Setaria italica
Seita.5G430200 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 44902619-44907618 Setaria italica
Seita.5G430200 10.0kb upstream 10.0kb upstream 17536 true scaffold_5: 44907619-44925154 Setaria italica
Seita.5G430200 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 44915155-44925154 Setaria italica
Seita.5G430200 10.0kb downstream 10.0kb downstream 17536 true scaffold_5: 44897619-44915154 Setaria italica
Seita.5G430200 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 44897619-44907618 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122195880 5267 Panicoideae View MSA
124573557 5269 Grass View MSA
122042002 5273 Angiosperm View MSA
121348678 5274 Embryophyte View MSA
123426540 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.727        
cufflinks 7.134        
cufflinks 3.88        
cufflinks 3.341       Low
cufflinks 2.846       Low
cufflinks 6.985        
cufflinks 5.397        
cufflinks 3.941        
cufflinks 3.116       Low
cufflinks 4.604        
cufflinks 7.031        
cufflinks 6.525        
cufflinks 5.564        
cufflinks 4.668        
cufflinks 7.763       High
cufflinks 6.069        
cufflinks 5.934        
cufflinks 7.74       High
cufflinks 4.366        
cufflinks 6.745        

0 Strain