Gene : Seita.5G431100 S. italica v2.2
Defline:  (1 of 1) 3.2.1.106 - Mannosyl-oligosaccharide glucosidase / Processing A-glucosidase I Genomic Order:  4311
Name:  ? Seita.5G431100 Secondary Identifier:  ? PAC:32681905
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.5G431100 0.5kb upstream 0.5kb upstream 8847 true scaffold_5: 44941424-44950270 Setaria italica
Seita.5G431100 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 44941424-44941923 Setaria italica
Seita.5G431100 0.5kb downstream 0.5kb downstream 8847 true scaffold_5: 44941924-44950770 Setaria italica
Seita.5G431100 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 44950271-44950770 Setaria italica
Seita.5G431100 1.0kb upstream 1.0kb upstream 9347 true scaffold_5: 44940924-44950270 Setaria italica
Seita.5G431100 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 44940924-44941923 Setaria italica
Seita.5G431100 1.0kb downstream 1.0kb downstream 9347 true scaffold_5: 44941924-44951270 Setaria italica
Seita.5G431100 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 44950271-44951270 Setaria italica
Seita.5G431100 2.0kb upstream 2.0kb upstream 10347 true scaffold_5: 44939924-44950270 Setaria italica
Seita.5G431100 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 44939924-44941923 Setaria italica
Seita.5G431100 2.0kb downstream 2.0kb downstream 10347 true scaffold_5: 44941924-44952270 Setaria italica
Seita.5G431100 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 44950271-44952270 Setaria italica
Seita.5G431100 5.0kb upstream 5.0kb upstream 13347 true scaffold_5: 44936924-44950270 Setaria italica
Seita.5G431100 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 44936924-44941923 Setaria italica
Seita.5G431100 5.0kb downstream 5.0kb downstream 13347 true scaffold_5: 44941924-44955270 Setaria italica
Seita.5G431100 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 44950271-44955270 Setaria italica
Seita.5G431100 10.0kb upstream 10.0kb upstream 18347 true scaffold_5: 44931924-44950270 Setaria italica
Seita.5G431100 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 44931924-44941923 Setaria italica
Seita.5G431100 10.0kb downstream 10.0kb downstream 18347 true scaffold_5: 44941924-44960270 Setaria italica
Seita.5G431100 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 44950271-44960270 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122183226 5267 Panicoideae View MSA
124576435 5269 Grass View MSA
122042619 5273 Angiosperm View MSA
121344723 5274 Embryophyte View MSA
123423792 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.215       High
cufflinks 4.568        
cufflinks 3.495        
cufflinks 2.766       Low
cufflinks 2.227       Low
cufflinks 4.563        
cufflinks 3.862        
cufflinks 3.658        
cufflinks 2.657       Low
cufflinks 3.006        
cufflinks 4.644        
cufflinks 6.188       High
cufflinks 5.156        
cufflinks 3.743        
cufflinks 5.89       High
cufflinks 3.212        
cufflinks 6.017       High
cufflinks 3.999        
cufflinks 2.697       Low
cufflinks 5.656       High

0 Strain