Gene : Seita.6G087100 S. italica v2.2
Defline:  (1 of 80) PF01357 - Pollen allergen (Pollen_allerg_1) Genomic Order:  871
Name:  ? Seita.6G087100 Secondary Identifier:  ? PAC:32700743
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.6G087100 0.5kb upstream 0.5kb upstream 857 true scaffold_6: 7721028-7721884 Setaria italica
Seita.6G087100 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 7721028-7721527 Setaria italica
Seita.6G087100 0.5kb downstream 0.5kb downstream 857 true scaffold_6: 7721528-7722384 Setaria italica
Seita.6G087100 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 7721885-7722384 Setaria italica
Seita.6G087100 1.0kb upstream 1.0kb upstream 1357 true scaffold_6: 7720528-7721884 Setaria italica
Seita.6G087100 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 7720528-7721527 Setaria italica
Seita.6G087100 1.0kb downstream 1.0kb downstream 1357 true scaffold_6: 7721528-7722884 Setaria italica
Seita.6G087100 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 7721885-7722884 Setaria italica
Seita.6G087100 2.0kb upstream 2.0kb upstream 2357 true scaffold_6: 7719528-7721884 Setaria italica
Seita.6G087100 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 7719528-7721527 Setaria italica
Seita.6G087100 2.0kb downstream 2.0kb downstream 2357 true scaffold_6: 7721528-7723884 Setaria italica
Seita.6G087100 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 7721885-7723884 Setaria italica
Seita.6G087100 5.0kb upstream 5.0kb upstream 5357 true scaffold_6: 7716528-7721884 Setaria italica
Seita.6G087100 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 7716528-7721527 Setaria italica
Seita.6G087100 5.0kb downstream 5.0kb downstream 5357 true scaffold_6: 7721528-7726884 Setaria italica
Seita.6G087100 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 7721885-7726884 Setaria italica
Seita.6G087100 10.0kb upstream 10.0kb upstream 10357 true scaffold_6: 7711528-7721884 Setaria italica
Seita.6G087100 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 7711528-7721527 Setaria italica
Seita.6G087100 10.0kb downstream 10.0kb downstream 10357 true scaffold_6: 7721528-7731884 Setaria italica
Seita.6G087100 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 7721885-7731884 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121794882 5273 Angiosperm Singleton cluster - no MSA
122054475 5267 Panicoideae Singleton cluster - no MSA
124354300 5269 Grass Singleton cluster - no MSA
121066055 5274 Embryophyte Singleton cluster - no MSA
123105716 5275 Viridiplantae Singleton cluster - no MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain