Gene : Seita.6G112700 S. italica v2.2
Defline:  (1 of 1) PTHR12758//PTHR12758:SF22 - APOPTOSIS INHIBITOR 5-RELATED Genomic Order:  1127
Name:  ? Seita.6G112700 Secondary Identifier:  ? PAC:32700662
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.6G112700 0.5kb upstream 0.5kb upstream 13223 true scaffold_6: 17846292-17859514 Setaria italica
Seita.6G112700 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 17859015-17859514 Setaria italica
Seita.6G112700 0.5kb downstream 0.5kb downstream 13223 true scaffold_6: 17845792-17859014 Setaria italica
Seita.6G112700 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 17845792-17846291 Setaria italica
Seita.6G112700 1.0kb upstream 1.0kb upstream 13723 true scaffold_6: 17846292-17860014 Setaria italica
Seita.6G112700 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 17859015-17860014 Setaria italica
Seita.6G112700 1.0kb downstream 1.0kb downstream 13723 true scaffold_6: 17845292-17859014 Setaria italica
Seita.6G112700 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 17845292-17846291 Setaria italica
Seita.6G112700 2.0kb upstream 2.0kb upstream 14723 true scaffold_6: 17846292-17861014 Setaria italica
Seita.6G112700 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 17859015-17861014 Setaria italica
Seita.6G112700 2.0kb downstream 2.0kb downstream 14723 true scaffold_6: 17844292-17859014 Setaria italica
Seita.6G112700 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 17844292-17846291 Setaria italica
Seita.6G112700 5.0kb upstream 5.0kb upstream 17723 true scaffold_6: 17846292-17864014 Setaria italica
Seita.6G112700 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 17859015-17864014 Setaria italica
Seita.6G112700 5.0kb downstream 5.0kb downstream 17723 true scaffold_6: 17841292-17859014 Setaria italica
Seita.6G112700 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 17841292-17846291 Setaria italica
Seita.6G112700 10.0kb upstream 10.0kb upstream 22723 true scaffold_6: 17846292-17869014 Setaria italica
Seita.6G112700 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 17859015-17869014 Setaria italica
Seita.6G112700 10.0kb downstream 10.0kb downstream 22723 true scaffold_6: 17836292-17859014 Setaria italica
Seita.6G112700 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 17836292-17846291 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180205 5267 Panicoideae View MSA
124573976 5269 Grass View MSA
122044535 5273 Angiosperm View MSA
121350111 5274 Embryophyte View MSA
123424635 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.789       High
cufflinks 7.435        
cufflinks 8.115       High
cufflinks 5.825        
cufflinks 5.795        
cufflinks 8.063       High
cufflinks 6.018        
cufflinks 4.079       Low
cufflinks 6.376        
cufflinks 4.811       Low
cufflinks 7.809       High
cufflinks 5.495        
cufflinks 5.784        
cufflinks 6.48        
cufflinks 6.713        
cufflinks 6.424        
cufflinks 5.558        
cufflinks 6.541        
cufflinks 4.715       Low
cufflinks 6.22        

0 Strain