Gene : Seita.6G114500 S. italica v2.2
Genomic Order:  1145 Name:  ? Seita.6G114500
Secondary Identifier:  ? PAC:32699549
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.6G114500 0.5kb upstream 0.5kb upstream 6301 true scaffold_6: 18767292-18773592 Setaria italica
Seita.6G114500 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 18773093-18773592 Setaria italica
Seita.6G114500 0.5kb downstream 0.5kb downstream 6301 true scaffold_6: 18766792-18773092 Setaria italica
Seita.6G114500 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 18766792-18767291 Setaria italica
Seita.6G114500 1.0kb upstream 1.0kb upstream 6801 true scaffold_6: 18767292-18774092 Setaria italica
Seita.6G114500 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 18773093-18774092 Setaria italica
Seita.6G114500 1.0kb downstream 1.0kb downstream 6801 true scaffold_6: 18766292-18773092 Setaria italica
Seita.6G114500 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 18766292-18767291 Setaria italica
Seita.6G114500 2.0kb upstream 2.0kb upstream 7801 true scaffold_6: 18767292-18775092 Setaria italica
Seita.6G114500 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 18773093-18775092 Setaria italica
Seita.6G114500 2.0kb downstream 2.0kb downstream 7801 true scaffold_6: 18765292-18773092 Setaria italica
Seita.6G114500 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 18765292-18767291 Setaria italica
Seita.6G114500 5.0kb upstream 5.0kb upstream 10801 true scaffold_6: 18767292-18778092 Setaria italica
Seita.6G114500 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 18773093-18778092 Setaria italica
Seita.6G114500 5.0kb downstream 5.0kb downstream 10801 true scaffold_6: 18762292-18773092 Setaria italica
Seita.6G114500 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 18762292-18767291 Setaria italica
Seita.6G114500 10.0kb upstream 10.0kb upstream 15801 true scaffold_6: 18767292-18783092 Setaria italica
Seita.6G114500 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 18773093-18783092 Setaria italica
Seita.6G114500 10.0kb downstream 10.0kb downstream 15801 true scaffold_6: 18757292-18773092 Setaria italica
Seita.6G114500 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 18757292-18767291 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122195299 5267 Panicoideae View MSA
124574294 5269 Grass View MSA
122042268 5273 Angiosperm View MSA
121347908 5274 Embryophyte View MSA
123425074 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.508        
cufflinks 2.304        
cufflinks 8.258        
cufflinks 6.735        
cufflinks 7.184        
cufflinks 1.895        
cufflinks 7.937        
cufflinks 8.76        
cufflinks 7.095        
cufflinks 1.191        
cufflinks 1.59        
cufflinks 0.89       Low
cufflinks 0.432       Low
cufflinks 7.107        
cufflinks 0.553       Low
cufflinks 18.856     High High
cufflinks 0.723       Low
cufflinks 2.352        
cufflinks 9.003       High
cufflinks 0.617       Low

0 Strain