Gene : Seita.6G118200 S. italica v2.2
Defline:  (1 of 45) PF03101 - FAR1 DNA-binding domain (FAR1) Genomic Order:  1182
Name:  ? Seita.6G118200 Secondary Identifier:  ? PAC:32700424
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.6G118200 0.5kb upstream 0.5kb upstream 917 true scaffold_6: 19791971-19792887 Setaria italica
Seita.6G118200 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 19792388-19792887 Setaria italica
Seita.6G118200 0.5kb downstream 0.5kb downstream 917 true scaffold_6: 19791471-19792387 Setaria italica
Seita.6G118200 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 19791471-19791970 Setaria italica
Seita.6G118200 1.0kb upstream 1.0kb upstream 1417 true scaffold_6: 19791971-19793387 Setaria italica
Seita.6G118200 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 19792388-19793387 Setaria italica
Seita.6G118200 1.0kb downstream 1.0kb downstream 1417 true scaffold_6: 19790971-19792387 Setaria italica
Seita.6G118200 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 19790971-19791970 Setaria italica
Seita.6G118200 2.0kb upstream 2.0kb upstream 2417 true scaffold_6: 19791971-19794387 Setaria italica
Seita.6G118200 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 19792388-19794387 Setaria italica
Seita.6G118200 2.0kb downstream 2.0kb downstream 2417 true scaffold_6: 19789971-19792387 Setaria italica
Seita.6G118200 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 19789971-19791970 Setaria italica
Seita.6G118200 5.0kb upstream 5.0kb upstream 5417 true scaffold_6: 19791971-19797387 Setaria italica
Seita.6G118200 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 19792388-19797387 Setaria italica
Seita.6G118200 5.0kb downstream 5.0kb downstream 5417 true scaffold_6: 19786971-19792387 Setaria italica
Seita.6G118200 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 19786971-19791970 Setaria italica
Seita.6G118200 10.0kb upstream 10.0kb upstream 10417 true scaffold_6: 19791971-19802387 Setaria italica
Seita.6G118200 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 19792388-19802387 Setaria italica
Seita.6G118200 10.0kb downstream 10.0kb downstream 10417 true scaffold_6: 19781971-19792387 Setaria italica
Seita.6G118200 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 19781971-19791970 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029789 5273 Angiosperm View MSA
122118360 5267 Panicoideae View MSA
124583627 5269 Grass View MSA
121299070 5274 Embryophyte View MSA
123336993 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain