Gene : Seita.6G074700 S. italica v2.2
Defline:  (1 of 1) PTHR11214:SF92 - BETA-1,3-GALACTOSYLTRANSFERASE 20-RELATED Genomic Order:  747
Name:  ? Seita.6G074700 Secondary Identifier:  ? PAC:32698996
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.6G074700 0.5kb upstream 0.5kb upstream 4552 true scaffold_6: 6583587-6588138 Setaria italica
Seita.6G074700 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 6587639-6588138 Setaria italica
Seita.6G074700 0.5kb downstream 0.5kb downstream 4552 true scaffold_6: 6583087-6587638 Setaria italica
Seita.6G074700 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 6583087-6583586 Setaria italica
Seita.6G074700 1.0kb upstream 1.0kb upstream 5052 true scaffold_6: 6583587-6588638 Setaria italica
Seita.6G074700 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 6587639-6588638 Setaria italica
Seita.6G074700 1.0kb downstream 1.0kb downstream 5052 true scaffold_6: 6582587-6587638 Setaria italica
Seita.6G074700 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 6582587-6583586 Setaria italica
Seita.6G074700 2.0kb upstream 2.0kb upstream 6052 true scaffold_6: 6583587-6589638 Setaria italica
Seita.6G074700 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 6587639-6589638 Setaria italica
Seita.6G074700 2.0kb downstream 2.0kb downstream 6052 true scaffold_6: 6581587-6587638 Setaria italica
Seita.6G074700 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 6581587-6583586 Setaria italica
Seita.6G074700 5.0kb upstream 5.0kb upstream 9052 true scaffold_6: 6583587-6592638 Setaria italica
Seita.6G074700 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 6587639-6592638 Setaria italica
Seita.6G074700 5.0kb downstream 5.0kb downstream 9052 true scaffold_6: 6578587-6587638 Setaria italica
Seita.6G074700 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 6578587-6583586 Setaria italica
Seita.6G074700 10.0kb upstream 10.0kb upstream 14052 true scaffold_6: 6583587-6597638 Setaria italica
Seita.6G074700 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 6587639-6597638 Setaria italica
Seita.6G074700 10.0kb downstream 10.0kb downstream 14052 true scaffold_6: 6573587-6587638 Setaria italica
Seita.6G074700 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 6573587-6583586 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184920 5267 Panicoideae View MSA
124574935 5269 Grass View MSA
122049644 5273 Angiosperm View MSA
121350326 5274 Embryophyte View MSA
123381679 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.789        
cufflinks 7.621        
cufflinks 4.679        
cufflinks 3.964       Low
cufflinks 4.017       Low
cufflinks 8.918       High
cufflinks 7.895        
cufflinks 6.356        
cufflinks 4.879        
cufflinks 8.683       High
cufflinks 6.449        
cufflinks 5.989        
cufflinks 5.141        
cufflinks 2.725       Low
cufflinks 6.296        
cufflinks 8.977       High
cufflinks 7.211        
cufflinks 5.876        
cufflinks 3.749       Low
cufflinks 6.306        

0 Strain