Gene : Seita.6G167800 S. italica v2.2
Defline:  (1 of 2) PTHR10652 - ADENYLYL CYCLASE-ASSOCIATED PROTEIN Genomic Order:  1678
Name:  ? Seita.6G167800 Secondary Identifier:  ? PAC:32701492
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.6G167800 0.5kb upstream 0.5kb upstream 5402 true scaffold_6: 29139992-29145393 Setaria italica
Seita.6G167800 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 29139992-29140491 Setaria italica
Seita.6G167800 0.5kb downstream 0.5kb downstream 5402 true scaffold_6: 29140492-29145893 Setaria italica
Seita.6G167800 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 29145394-29145893 Setaria italica
Seita.6G167800 1.0kb upstream 1.0kb upstream 5902 true scaffold_6: 29139492-29145393 Setaria italica
Seita.6G167800 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 29139492-29140491 Setaria italica
Seita.6G167800 1.0kb downstream 1.0kb downstream 5902 true scaffold_6: 29140492-29146393 Setaria italica
Seita.6G167800 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 29145394-29146393 Setaria italica
Seita.6G167800 2.0kb upstream 2.0kb upstream 6902 true scaffold_6: 29138492-29145393 Setaria italica
Seita.6G167800 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 29138492-29140491 Setaria italica
Seita.6G167800 2.0kb downstream 2.0kb downstream 6902 true scaffold_6: 29140492-29147393 Setaria italica
Seita.6G167800 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 29145394-29147393 Setaria italica
Seita.6G167800 5.0kb upstream 5.0kb upstream 9902 true scaffold_6: 29135492-29145393 Setaria italica
Seita.6G167800 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 29135492-29140491 Setaria italica
Seita.6G167800 5.0kb downstream 5.0kb downstream 9902 true scaffold_6: 29140492-29150393 Setaria italica
Seita.6G167800 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 29145394-29150393 Setaria italica
Seita.6G167800 10.0kb upstream 10.0kb upstream 14902 true scaffold_6: 29130492-29145393 Setaria italica
Seita.6G167800 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 29130492-29140491 Setaria italica
Seita.6G167800 10.0kb downstream 10.0kb downstream 14902 true scaffold_6: 29140492-29155393 Setaria italica
Seita.6G167800 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 29145394-29155393 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122193479 5267 Panicoideae View MSA
124580382 5269 Grass View MSA
122047281 5273 Angiosperm View MSA
121343811 5274 Embryophyte View MSA
123426787 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.017     Low  
cufflinks 0.019     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low Low
cufflinks 0.002     Low Low
cufflinks 0.074     Low High
cufflinks 0.009     Low  
cufflinks 0.001     Low Low
cufflinks 0.002     Low Low
cufflinks 0.024     Low  
cufflinks 0.013     Low  
cufflinks 0.011     Low  
cufflinks 0.015     Low  
cufflinks 0.008     Low  
cufflinks 0.028     Low  
cufflinks 0.013     Low  
cufflinks 0.042     Low High
cufflinks 0.038     Low High
cufflinks 0.006     Low  
cufflinks 0.029     Low  

0 Strain