Gene : Seita.6G197000 S. italica v2.2
Defline:  (1 of 1) PTHR10766:SF44 - ENDOMEMBRANE FAMILY PROTEIN 70 Genomic Order:  1970
Name:  ? Seita.6G197000 Secondary Identifier:  ? PAC:32700808
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.6G197000 0.5kb upstream 0.5kb upstream 4921 true scaffold_6: 31838692-31843612 Setaria italica
Seita.6G197000 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 31843113-31843612 Setaria italica
Seita.6G197000 0.5kb downstream 0.5kb downstream 4921 true scaffold_6: 31838192-31843112 Setaria italica
Seita.6G197000 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 31838192-31838691 Setaria italica
Seita.6G197000 1.0kb upstream 1.0kb upstream 5421 true scaffold_6: 31838692-31844112 Setaria italica
Seita.6G197000 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 31843113-31844112 Setaria italica
Seita.6G197000 1.0kb downstream 1.0kb downstream 5421 true scaffold_6: 31837692-31843112 Setaria italica
Seita.6G197000 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 31837692-31838691 Setaria italica
Seita.6G197000 2.0kb upstream 2.0kb upstream 6421 true scaffold_6: 31838692-31845112 Setaria italica
Seita.6G197000 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 31843113-31845112 Setaria italica
Seita.6G197000 2.0kb downstream 2.0kb downstream 6421 true scaffold_6: 31836692-31843112 Setaria italica
Seita.6G197000 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 31836692-31838691 Setaria italica
Seita.6G197000 5.0kb upstream 5.0kb upstream 9421 true scaffold_6: 31838692-31848112 Setaria italica
Seita.6G197000 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 31843113-31848112 Setaria italica
Seita.6G197000 5.0kb downstream 5.0kb downstream 9421 true scaffold_6: 31833692-31843112 Setaria italica
Seita.6G197000 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 31833692-31838691 Setaria italica
Seita.6G197000 10.0kb upstream 10.0kb upstream 14421 true scaffold_6: 31838692-31853112 Setaria italica
Seita.6G197000 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 31843113-31853112 Setaria italica
Seita.6G197000 10.0kb downstream 10.0kb downstream 14421 true scaffold_6: 31828692-31843112 Setaria italica
Seita.6G197000 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 31828692-31838691 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179612 5267 Panicoideae View MSA
124574936 5269 Grass View MSA
122044185 5273 Angiosperm View MSA
121349188 5274 Embryophyte View MSA
123426870 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.22     High  
cufflinks 44.782     High High
cufflinks 26.156     High  
cufflinks 18.164     High  
cufflinks 25.54     High  
cufflinks 42.256     High High
cufflinks 25.207     High  
cufflinks 25.155     High  
cufflinks 32.739     High High
cufflinks 17.902     High  
cufflinks 34.771     High High
cufflinks 14.968     High Low
cufflinks 19.118     High  
cufflinks 24.334     High  
cufflinks 24.641     High  
cufflinks 23.684     High  
cufflinks 16.989     High Low
cufflinks 23.167     High  
cufflinks 15.9     High Low
cufflinks 20.379     High  

0 Strain