Gene : Seita.6G195300 S. italica v2.2
Defline:  (1 of 1) PTHR31268:SF4 - GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 1-RELATED Genomic Order:  1953
Name:  ? Seita.6G195300 Secondary Identifier:  ? PAC:32700268
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.6G195300 0.5kb upstream 0.5kb upstream 4820 true scaffold_6: 31733612-31738431 Setaria italica
Seita.6G195300 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 31733612-31734111 Setaria italica
Seita.6G195300 0.5kb downstream 0.5kb downstream 4820 true scaffold_6: 31734112-31738931 Setaria italica
Seita.6G195300 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 31738432-31738931 Setaria italica
Seita.6G195300 1.0kb upstream 1.0kb upstream 5320 true scaffold_6: 31733112-31738431 Setaria italica
Seita.6G195300 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 31733112-31734111 Setaria italica
Seita.6G195300 1.0kb downstream 1.0kb downstream 5320 true scaffold_6: 31734112-31739431 Setaria italica
Seita.6G195300 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 31738432-31739431 Setaria italica
Seita.6G195300 2.0kb upstream 2.0kb upstream 6320 true scaffold_6: 31732112-31738431 Setaria italica
Seita.6G195300 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 31732112-31734111 Setaria italica
Seita.6G195300 2.0kb downstream 2.0kb downstream 6320 true scaffold_6: 31734112-31740431 Setaria italica
Seita.6G195300 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 31738432-31740431 Setaria italica
Seita.6G195300 5.0kb upstream 5.0kb upstream 9320 true scaffold_6: 31729112-31738431 Setaria italica
Seita.6G195300 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 31729112-31734111 Setaria italica
Seita.6G195300 5.0kb downstream 5.0kb downstream 9320 true scaffold_6: 31734112-31743431 Setaria italica
Seita.6G195300 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 31738432-31743431 Setaria italica
Seita.6G195300 10.0kb upstream 10.0kb upstream 14320 true scaffold_6: 31724112-31738431 Setaria italica
Seita.6G195300 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 31724112-31734111 Setaria italica
Seita.6G195300 10.0kb downstream 10.0kb downstream 14320 true scaffold_6: 31734112-31748431 Setaria italica
Seita.6G195300 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 31738432-31748431 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177226 5267 Panicoideae View MSA
124577676 5269 Grass View MSA
122044208 5273 Angiosperm View MSA
123429020 5275 Viridiplantae View MSA
121345613 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 53.831     High  
cufflinks 14.289     High Low
cufflinks 263.293     High High
cufflinks 332.586     High High
cufflinks 261.489     High High
cufflinks 16.953     High Low
cufflinks 78.404     High  
cufflinks 170.054     High  
cufflinks 175.022     High  
cufflinks 27.93     High Low
cufflinks 44.889     High  
cufflinks 84.627     High  
cufflinks 80.02     High  
cufflinks 152.578     High  
cufflinks 31.04     High  
cufflinks 295.545     High High
cufflinks 33.555     High  
cufflinks 598.582     High High
cufflinks 144.316     High  
cufflinks 28.639     High Low

0 Strain