Gene : Seita.6G205000 S. italica v2.2
Genomic Order:  2050 Name:  ? Seita.6G205000
Secondary Identifier:  ? PAC:32700970
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.6G205000 0.5kb upstream 0.5kb upstream 3788 true scaffold_6: 32454940-32458727 Setaria italica
Seita.6G205000 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 32458228-32458727 Setaria italica
Seita.6G205000 0.5kb downstream 0.5kb downstream 3788 true scaffold_6: 32454440-32458227 Setaria italica
Seita.6G205000 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 32454440-32454939 Setaria italica
Seita.6G205000 1.0kb upstream 1.0kb upstream 4288 true scaffold_6: 32454940-32459227 Setaria italica
Seita.6G205000 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 32458228-32459227 Setaria italica
Seita.6G205000 1.0kb downstream 1.0kb downstream 4288 true scaffold_6: 32453940-32458227 Setaria italica
Seita.6G205000 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 32453940-32454939 Setaria italica
Seita.6G205000 2.0kb upstream 2.0kb upstream 5288 true scaffold_6: 32454940-32460227 Setaria italica
Seita.6G205000 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 32458228-32460227 Setaria italica
Seita.6G205000 2.0kb downstream 2.0kb downstream 5288 true scaffold_6: 32452940-32458227 Setaria italica
Seita.6G205000 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 32452940-32454939 Setaria italica
Seita.6G205000 5.0kb upstream 5.0kb upstream 8288 true scaffold_6: 32454940-32463227 Setaria italica
Seita.6G205000 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 32458228-32463227 Setaria italica
Seita.6G205000 5.0kb downstream 5.0kb downstream 8288 true scaffold_6: 32449940-32458227 Setaria italica
Seita.6G205000 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 32449940-32454939 Setaria italica
Seita.6G205000 10.0kb upstream 10.0kb upstream 13288 true scaffold_6: 32454940-32468227 Setaria italica
Seita.6G205000 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 32458228-32468227 Setaria italica
Seita.6G205000 10.0kb downstream 10.0kb downstream 13288 true scaffold_6: 32444940-32458227 Setaria italica
Seita.6G205000 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 32444940-32454939 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177809 5267 Panicoideae View MSA
124580622 5269 Grass View MSA
122049110 5273 Angiosperm View MSA
121351569 5274 Embryophyte View MSA
123382231 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.493        
cufflinks 9.097        
cufflinks 0.069     Low Low
cufflinks 0.016     Low Low
cufflinks 0.954        
cufflinks 10.021        
cufflinks 9.349        
cufflinks 5.671        
cufflinks 4.962        
cufflinks 4.581        
cufflinks 7.191        
cufflinks 2.175        
cufflinks 2.746        
cufflinks 0.127     Low Low
cufflinks 4.433        
cufflinks 4.758        
cufflinks 2.946        
cufflinks 2.318        
cufflinks 0.143       Low
cufflinks 4.229        

0 Strain