Gene : Seita.6G205800 S. italica v2.2
Defline:  (1 of 1) PTHR30540//PTHR30540:SF13 - OSMOTIC STRESS POTASSIUM TRANSPORTER Genomic Order:  2058
Name:  ? Seita.6G205800 Secondary Identifier:  ? PAC:32698603
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.6G205800 0.5kb upstream 0.5kb upstream 4760 true scaffold_6: 32521839-32526598 Setaria italica
Seita.6G205800 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 32521839-32522338 Setaria italica
Seita.6G205800 0.5kb downstream 0.5kb downstream 4760 true scaffold_6: 32522339-32527098 Setaria italica
Seita.6G205800 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 32526599-32527098 Setaria italica
Seita.6G205800 1.0kb upstream 1.0kb upstream 5260 true scaffold_6: 32521339-32526598 Setaria italica
Seita.6G205800 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 32521339-32522338 Setaria italica
Seita.6G205800 1.0kb downstream 1.0kb downstream 5260 true scaffold_6: 32522339-32527598 Setaria italica
Seita.6G205800 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 32526599-32527598 Setaria italica
Seita.6G205800 2.0kb upstream 2.0kb upstream 6260 true scaffold_6: 32520339-32526598 Setaria italica
Seita.6G205800 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 32520339-32522338 Setaria italica
Seita.6G205800 2.0kb downstream 2.0kb downstream 6260 true scaffold_6: 32522339-32528598 Setaria italica
Seita.6G205800 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 32526599-32528598 Setaria italica
Seita.6G205800 5.0kb upstream 5.0kb upstream 9260 true scaffold_6: 32517339-32526598 Setaria italica
Seita.6G205800 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 32517339-32522338 Setaria italica
Seita.6G205800 5.0kb downstream 5.0kb downstream 9260 true scaffold_6: 32522339-32531598 Setaria italica
Seita.6G205800 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 32526599-32531598 Setaria italica
Seita.6G205800 10.0kb upstream 10.0kb upstream 14260 true scaffold_6: 32512339-32526598 Setaria italica
Seita.6G205800 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 32512339-32522338 Setaria italica
Seita.6G205800 10.0kb downstream 10.0kb downstream 14260 true scaffold_6: 32522339-32536598 Setaria italica
Seita.6G205800 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 32526599-32536598 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177241 5267 Panicoideae View MSA
124580663 5269 Grass View MSA
122049988 5273 Angiosperm View MSA
123429147 5275 Viridiplantae View MSA
121348736 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.034     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.404       High
cufflinks 0.005     Low  
cufflinks 0.006     Low  
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain