Gene : Seita.6G152400 S. italica v2.2
Defline:  (1 of 2) PTHR10502//PTHR10502:SF120 - ANNEXIN Genomic Order:  1524
Name:  ? Seita.6G152400 Secondary Identifier:  ? PAC:32700649
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.6G152400 0.5kb upstream 0.5kb upstream 1850 true scaffold_6: 27132256-27134105 Setaria italica
Seita.6G152400 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 27132256-27132755 Setaria italica
Seita.6G152400 0.5kb downstream 0.5kb downstream 1850 true scaffold_6: 27132756-27134605 Setaria italica
Seita.6G152400 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 27134106-27134605 Setaria italica
Seita.6G152400 1.0kb upstream 1.0kb upstream 2350 true scaffold_6: 27131756-27134105 Setaria italica
Seita.6G152400 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 27131756-27132755 Setaria italica
Seita.6G152400 1.0kb downstream 1.0kb downstream 2350 true scaffold_6: 27132756-27135105 Setaria italica
Seita.6G152400 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 27134106-27135105 Setaria italica
Seita.6G152400 2.0kb upstream 2.0kb upstream 3350 true scaffold_6: 27130756-27134105 Setaria italica
Seita.6G152400 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 27130756-27132755 Setaria italica
Seita.6G152400 2.0kb downstream 2.0kb downstream 3350 true scaffold_6: 27132756-27136105 Setaria italica
Seita.6G152400 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 27134106-27136105 Setaria italica
Seita.6G152400 5.0kb upstream 5.0kb upstream 6350 true scaffold_6: 27127756-27134105 Setaria italica
Seita.6G152400 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 27127756-27132755 Setaria italica
Seita.6G152400 5.0kb downstream 5.0kb downstream 6350 true scaffold_6: 27132756-27139105 Setaria italica
Seita.6G152400 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 27134106-27139105 Setaria italica
Seita.6G152400 10.0kb upstream 10.0kb upstream 11350 true scaffold_6: 27122756-27134105 Setaria italica
Seita.6G152400 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 27122756-27132755 Setaria italica
Seita.6G152400 10.0kb downstream 10.0kb downstream 11350 true scaffold_6: 27132756-27144105 Setaria italica
Seita.6G152400 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 27134106-27144105 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176294 5267 Panicoideae View MSA
124585710 5269 Grass View MSA
122043573 5273 Angiosperm View MSA
121348021 5274 Embryophyte View MSA
123380707 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.423        
cufflinks 0.724       Low
cufflinks 8.021        
cufflinks 7.304        
cufflinks 6.296        
cufflinks 1.863       Low
cufflinks 11.69        
cufflinks 10.746        
cufflinks 5.929        
cufflinks 23.659     High High
cufflinks 8.119        
cufflinks 6.739        
cufflinks 5.513        
cufflinks 22.757     High High
cufflinks 5.493        
cufflinks 5.593        
cufflinks 8.423        
cufflinks 4.077        
cufflinks 22.165     High High
cufflinks 12.59        

0 Strain