Gene : Seita.6G156100 S. italica v2.2
Defline:  (1 of 1) PTHR22870//PTHR22870:SF206 - REGULATOR OF CHROMOSOME CONDENSATION Genomic Order:  1561
Name:  ? Seita.6G156100 Secondary Identifier:  ? PAC:32699104
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.6G156100 0.5kb upstream 0.5kb upstream 4666 true scaffold_6: 27608808-27613473 Setaria italica
Seita.6G156100 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 27612974-27613473 Setaria italica
Seita.6G156100 0.5kb downstream 0.5kb downstream 4666 true scaffold_6: 27608308-27612973 Setaria italica
Seita.6G156100 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 27608308-27608807 Setaria italica
Seita.6G156100 1.0kb upstream 1.0kb upstream 5166 true scaffold_6: 27608808-27613973 Setaria italica
Seita.6G156100 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 27612974-27613973 Setaria italica
Seita.6G156100 1.0kb downstream 1.0kb downstream 5166 true scaffold_6: 27607808-27612973 Setaria italica
Seita.6G156100 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 27607808-27608807 Setaria italica
Seita.6G156100 2.0kb upstream 2.0kb upstream 6166 true scaffold_6: 27608808-27614973 Setaria italica
Seita.6G156100 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 27612974-27614973 Setaria italica
Seita.6G156100 2.0kb downstream 2.0kb downstream 6166 true scaffold_6: 27606808-27612973 Setaria italica
Seita.6G156100 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 27606808-27608807 Setaria italica
Seita.6G156100 5.0kb upstream 5.0kb upstream 9166 true scaffold_6: 27608808-27617973 Setaria italica
Seita.6G156100 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 27612974-27617973 Setaria italica
Seita.6G156100 5.0kb downstream 5.0kb downstream 9166 true scaffold_6: 27603808-27612973 Setaria italica
Seita.6G156100 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 27603808-27608807 Setaria italica
Seita.6G156100 10.0kb upstream 10.0kb upstream 14166 true scaffold_6: 27608808-27622973 Setaria italica
Seita.6G156100 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 27612974-27622973 Setaria italica
Seita.6G156100 10.0kb downstream 10.0kb downstream 14166 true scaffold_6: 27598808-27612973 Setaria italica
Seita.6G156100 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 27598808-27608807 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176393 5267 Panicoideae View MSA
124569951 5269 Grass View MSA
122042833 5273 Angiosperm View MSA
121348497 5274 Embryophyte View MSA
123428657 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.704        
cufflinks 10.018        
cufflinks 11.817     High  
cufflinks 17.385     High  
cufflinks 36.955     High High
cufflinks 11.692        
cufflinks 9.989        
cufflinks 36.619     High High
cufflinks 49.966     High High
cufflinks 10.396        
cufflinks 11.906        
cufflinks 13.984     High  
cufflinks 16.604     High  
cufflinks 8.384        
cufflinks 12.735        
cufflinks 9.889        
cufflinks 18.289     High  
cufflinks 15.779     High  
cufflinks 5.568       Low
cufflinks 14.213        

0 Strain