Gene : Seita.6G254300 S. italica v2.2
Defline:  (1 of 1) PTHR22884//PTHR22884:SF328 - SET DOMAIN PROTEINS Genomic Order:  2543
Name:  ? Seita.6G254300 Secondary Identifier:  ? PAC:32699264
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.6G254300 0.5kb upstream 0.5kb upstream 2420 true scaffold_6: 35909936-35912355 Setaria italica
Seita.6G254300 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 35911856-35912355 Setaria italica
Seita.6G254300 0.5kb downstream 0.5kb downstream 2420 true scaffold_6: 35909436-35911855 Setaria italica
Seita.6G254300 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 35909436-35909935 Setaria italica
Seita.6G254300 1.0kb upstream 1.0kb upstream 2920 true scaffold_6: 35909936-35912855 Setaria italica
Seita.6G254300 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 35911856-35912855 Setaria italica
Seita.6G254300 1.0kb downstream 1.0kb downstream 2920 true scaffold_6: 35908936-35911855 Setaria italica
Seita.6G254300 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 35908936-35909935 Setaria italica
Seita.6G254300 2.0kb upstream 2.0kb upstream 3920 true scaffold_6: 35909936-35913855 Setaria italica
Seita.6G254300 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 35911856-35913855 Setaria italica
Seita.6G254300 2.0kb downstream 2.0kb downstream 3920 true scaffold_6: 35907936-35911855 Setaria italica
Seita.6G254300 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 35907936-35909935 Setaria italica
Seita.6G254300 5.0kb upstream 5.0kb upstream 6920 true scaffold_6: 35909936-35916855 Setaria italica
Seita.6G254300 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 35911856-35916855 Setaria italica
Seita.6G254300 5.0kb downstream 5.0kb downstream 6920 true scaffold_6: 35904936-35911855 Setaria italica
Seita.6G254300 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 35904936-35909935 Setaria italica
Seita.6G254300 10.0kb upstream 10.0kb upstream 11920 true scaffold_6: 35909936-35921855 Setaria italica
Seita.6G254300 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 35911856-35921855 Setaria italica
Seita.6G254300 10.0kb downstream 10.0kb downstream 11920 true scaffold_6: 35899936-35911855 Setaria italica
Seita.6G254300 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 35899936-35909935 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177219 5267 Panicoideae View MSA
124578691 5269 Grass View MSA
122047212 5273 Angiosperm View MSA
123428946 5275 Viridiplantae View MSA
121310709 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.496        
cufflinks 3.775       High
cufflinks 2.087        
cufflinks 1.498       Low
cufflinks 1.762        
cufflinks 3.964       High
cufflinks 3.038        
cufflinks 2.651        
cufflinks 1.814        
cufflinks 2.556        
cufflinks 2.979        
cufflinks 1.048       Low
cufflinks 1.443       Low
cufflinks 1.732        
cufflinks 2.221        
cufflinks 3.097       High
cufflinks 2.148        
cufflinks 2.553        
cufflinks 1.695        
cufflinks 2.023        

0 Strain