Gene : Seita.6G252600 S. italica v2.2
Defline:  (1 of 1) 3.4.11.14 - Cytosol alanyl aminopeptidase / Soluble alanyl aminopeptidase Genomic Order:  2526
Name:  ? Seita.6G252600 Secondary Identifier:  ? PAC:32700188
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.6G252600 0.5kb upstream 0.5kb upstream 13786 true scaffold_6: 35793665-35807450 Setaria italica
Seita.6G252600 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 35806951-35807450 Setaria italica
Seita.6G252600 0.5kb downstream 0.5kb downstream 13786 true scaffold_6: 35793165-35806950 Setaria italica
Seita.6G252600 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 35793165-35793664 Setaria italica
Seita.6G252600 1.0kb upstream 1.0kb upstream 14286 true scaffold_6: 35793665-35807950 Setaria italica
Seita.6G252600 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 35806951-35807950 Setaria italica
Seita.6G252600 1.0kb downstream 1.0kb downstream 14286 true scaffold_6: 35792665-35806950 Setaria italica
Seita.6G252600 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 35792665-35793664 Setaria italica
Seita.6G252600 2.0kb upstream 2.0kb upstream 15286 true scaffold_6: 35793665-35808950 Setaria italica
Seita.6G252600 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 35806951-35808950 Setaria italica
Seita.6G252600 2.0kb downstream 2.0kb downstream 15286 true scaffold_6: 35791665-35806950 Setaria italica
Seita.6G252600 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 35791665-35793664 Setaria italica
Seita.6G252600 5.0kb upstream 5.0kb upstream 18286 true scaffold_6: 35793665-35811950 Setaria italica
Seita.6G252600 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 35806951-35811950 Setaria italica
Seita.6G252600 5.0kb downstream 5.0kb downstream 18286 true scaffold_6: 35788665-35806950 Setaria italica
Seita.6G252600 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 35788665-35793664 Setaria italica
Seita.6G252600 10.0kb upstream 10.0kb upstream 23286 true scaffold_6: 35793665-35816950 Setaria italica
Seita.6G252600 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 35806951-35816950 Setaria italica
Seita.6G252600 10.0kb downstream 10.0kb downstream 23286 true scaffold_6: 35783665-35806950 Setaria italica
Seita.6G252600 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 35783665-35793664 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178909 5267 Panicoideae View MSA
124589139 5269 Grass View MSA
122042942 5273 Angiosperm View MSA
121349880 5274 Embryophyte View MSA
123428340 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.925        
cufflinks 10.884        
cufflinks 22.173     High High
cufflinks 18.51     High High
cufflinks 12.248     High  
cufflinks 10.208        
cufflinks 11.936        
cufflinks 9.542        
cufflinks 9.885        
cufflinks 8.251       Low
cufflinks 13.538     High  
cufflinks 10.207        
cufflinks 10.003        
cufflinks 18.666     High High
cufflinks 12.174        
cufflinks 12.752     High  
cufflinks 10.845        
cufflinks 16.416     High High
cufflinks 9.412        
cufflinks 10.37        

0 Strain